Table 2 Gene category of S. banzragczii and S. marginata plastomes

RNA genes

ribosomal RNA genes (rRNA)

rrn5^c, rrn4.5^c, rrn16^c, rrn23^{a, c}

Transfer RNA genes (tRNA)

trnA-UGC^{a, c}, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCC^a, trnH-GUG, trnI-CAU^c, trnI-GAU^a, trnK-UUU^a, trnL-CAA^c, trnL-UAA^a, trnL-UAG, trnM-CAU, trnN-GUU^c, trnP-UGG, trnQ-UUG, trnR-ACG^c, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC^c, trnV-UAC^a, trnW-CCA, trnY-GUA

Ribosomal

proteins

Small subunit of ribosome

rps2, rps3, rps4, rps7^c, rps8, rps11, rps12^{c, b, d}, rps14, rps15, rps16^a, rps18 rps19^c

Transcription

Large subunit of ribosome

rpl2^{a, c}, rpl16^a, rpl14, rpl20, rpl22, rpl23^c, rpl33, rpl36, rpl32

RNA polymerase

rpoA, rpoB, rpoC1^a, rpoC2

Protein

genes

Photosystem I

psaA, psaB, psaC, psaI, psaJ, ycf3^b, ycf4

Photosystem II

psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ

Cytochrome b6/f

petA, petB^a, petD^{a, d}, petG, petL, petN

ATP synthase

atpA, atpB, atpE, atpF^a, atpH, atpI

Rubisco

rbcL

NADH dehydrogenase

ndhA^a, ndhB^{a, c}, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK

ATP-dependent protease subunit P

clpP^b

Chloroplast envelope membrane protein

cemA

Transitional initiation factor

infA

Other genes

Maturase

matK

Subunit acetyl-coA carboxylase

accD

C-type cytochrome synthesis

ccsA

Hypothetical proteins

ycf1^c, ycf2^c, ycf15^{e, c}

Component of TIC complex

ycf3^b