Kind of variant | Sequence position | Nucleotide variation | ||
---|---|---|---|---|
Single nucleotide polymorphism | Deletion | Insertion | ||
ITS1 | Â | Â | Â | Â |
 V1/V1* | 19 | G, A/R |  |  |
 V2 | 31 | T, C |  |  |
 V3/V3* | 32 | G, C/S |  |  |
 V4 | 114 | G, C |  |  |
 V5 | 116–117 |  |  | GGAGAG |
 V6 | 117–118 | TG, AT |  |  |
 V7 | 125–126 | TC, AT |  |  |
 V8/V8* | 129 | T, A/C |  |  |
 V9 | 135–142 |  | ATTTATTC |  |
 V10 | 152 | A, G |  |  |
 V11 | 168 | C, T |  |  |
 V12 | 193 |  | A |  |
 V13 | 197 | T, C |  |  |
ITS2 | Â | Â | Â | Â |
 V14/V14* | 420 | T, C/Y |  |  |
 V15/V15* | 442 | G, A/R |  |  |
 V16/V16* | 469 | A, G/R |  |  |
 V17/V17* | 546 | A, G/R |  |  |
 V18/V18* | 593 | C, G/S |  |  |
 V19 | 594–595 |  | AC |  |
 V20 | 600–601 |  |  | C |