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Fig. 1 | Botanical Studies

Fig. 1

From: Whole plastid transcriptomes reveal abundant RNA editing sites and differential editing status in Phalaenopsis aphrodite subsp. formosana

Fig. 1

Seven newly identified edits with high editing efficiency in protein-coding transcripts of moth orchid. The upstream and downstream 10 nucleotide from the indicated edits (C to U conversion) in protein-coding transcripts of moth orchid and the corresponding regions from other eight species of seed plants were multiple aligned by using LaserGene (DNAstar, USA). a petL-56; b rps12-221; c ccsA-336; d psbN-29 and -30; e petG-56; f rps3-583. Orchid, Phalaenopsis aphrodite; Maize, Zea mays; Rice, Oryza sativa; Coconut, Cocos nucifera; Arabidopsis, Arabidopsis thaliana; Tobacco, Nicotiana tabacum; Amborella, Amborella trichopoda; Pine, Pinus thunbergi, Cycas, Cycas taitungensis. Note, no petL gene of Amborella and Pine was annotated in NCBI database. The arrowhead indicates the editing sites in orchid, and the substitution of amino acid is shown above. The underline indicates the codon position, which code for amino acids as shown underneath among plants except orchid

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