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Table 2 Genetic polymorphism parameters of 36 samples generated by 3 ISSR and 7 SCoT primers

From: Identification of seeds based on molecular markers and secondary metabolites in Senna obtusifolia and Senna occidentalis

Primer Primer sequence Total bands Polymorphic bands PPB (%)
(5′→3′) Sob Soc Sob Soc Sob Soc
UBC880 (GA)8YG 29 21 20 15 68.9 71.4
UBC881 GGGT(GGGGT)2G 23 17 17 12 73.9 70.6
UBC885 BDB(CA) 7 18 16 14 8 77.8 50.0
Average 23.3 18.0 17.0 11.7 73.5 64.0
Total 70 54 51 35 72.9 64.8
SCoT 8 ACCATGGCTACCACCGCA 20 15 18 12 90.0 80.0
SCoT 21 CCATGGCTACCACCGCCT 24 17 20 14 83.3 82.4
SCoT 27 ACAATGGCTACCACTGCC 16 11 15 10 93.8 90.9
SCoT 42 ACCATGGCTACCACCGGC 18 11 14 10 77.8 90.9
SCoT 43 ACCATGGCTACCACCGCC 15 12 11 11 73.3 91.7
SCoT 44 ACGACATGGCGACCCACA 17 13 16 11 94.1 84.6
SCoT 66 ACAATGGCTACCACTAGC 21 13 18 10 85.7 76.9
Average 18.7 13.1 16.0 11.1 85.4 85.7
Total 131 92 112 78 85.5 84.8
  1. Sob: S. obtusifolia; Soc: S. occidentalis; PPB: percentage of polymorphic bands