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Table 3 Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment of significantly up/down-regulated DEGs in R2B1/R4B1

From: Comparative RNA-Seq analysis on the regulation of cucumber sex differentiation under different ratios of blue and red light

Pathway DEGs with pathway annotation (543) P-value  
Plant hormone signal transduction 49 0.000917 Up-regulated DEGs in R2B1
Protein processing in endoplasmic reticulum 40 0.000665
RNA transport 33 0.012593
Spliceosome 31 0.078185
Endocytosis 25 0.010854
Pyrimidine metabolism 24 0.029783
RNA degradation 22 0.001054
Ubiquitin mediated proteolysis 21 0.0133
Starch and sucrose metabolism 6 0.024124
Alanine, aspartate and glutamate metabolism 4 0.002149 Up-regulated DEGs in R4B1
Diterpenoid biosynthesis 3 0.005284
Insulin resistance 3 0.010482
Biosynthesis of amino acids 34 0.000934 Down-regulated DEGs in R2B1
Protein processing in endoplasmic reticulum 29 0.002805
RNA transport 29 0.000742
Spliceosome 28 0.004517
Purine metabolism 25 0.00642
Aminoacyl-tRNA biosynthesis 23 0
Pyrimidine metabolism 22 0.001743
RNA polymerase 10 0.034698
Plant hormone signal transduction 16 0.955624
Ribosome 16 0 Down-regulated DEGs in R4B1
Porphyrin and chlorophyll metabolism 5 0.000222
Photosynthesis 4 0.002138