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Table 3 Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment of significantly up/down-regulated DEGs in R2B1/R4B1

From: Comparative RNA-Seq analysis on the regulation of cucumber sex differentiation under different ratios of blue and red light

Pathway

DEGs with pathway annotation (543)

P-value

 

Plant hormone signal transduction

49

0.000917

Up-regulated DEGs in R2B1

Protein processing in endoplasmic reticulum

40

0.000665

RNA transport

33

0.012593

Spliceosome

31

0.078185

Endocytosis

25

0.010854

Pyrimidine metabolism

24

0.029783

RNA degradation

22

0.001054

Ubiquitin mediated proteolysis

21

0.0133

Starch and sucrose metabolism

6

0.024124

Alanine, aspartate and glutamate metabolism

4

0.002149

Up-regulated DEGs in R4B1

Diterpenoid biosynthesis

3

0.005284

Insulin resistance

3

0.010482

Biosynthesis of amino acids

34

0.000934

Down-regulated DEGs in R2B1

Protein processing in endoplasmic reticulum

29

0.002805

RNA transport

29

0.000742

Spliceosome

28

0.004517

Purine metabolism

25

0.00642

Aminoacyl-tRNA biosynthesis

23

0

Pyrimidine metabolism

22

0.001743

RNA polymerase

10

0.034698

Plant hormone signal transduction

16

0.955624

Ribosome

16

0

Down-regulated DEGs in R4B1

Porphyrin and chlorophyll metabolism

5

0.000222

Photosynthesis

4

0.002138