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Table 3 Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment of significantly up/down-regulated DEGs in R2B1/R4B1

From: Comparative RNA-Seq analysis on the regulation of cucumber sex differentiation under different ratios of blue and red light

PathwayDEGs with pathway annotation (543)P-value 
Plant hormone signal transduction490.000917Up-regulated DEGs in R2B1
Protein processing in endoplasmic reticulum400.000665
RNA transport330.012593
Spliceosome310.078185
Endocytosis250.010854
Pyrimidine metabolism240.029783
RNA degradation220.001054
Ubiquitin mediated proteolysis210.0133
Starch and sucrose metabolism60.024124
Alanine, aspartate and glutamate metabolism40.002149Up-regulated DEGs in R4B1
Diterpenoid biosynthesis30.005284
Insulin resistance30.010482
Biosynthesis of amino acids340.000934Down-regulated DEGs in R2B1
Protein processing in endoplasmic reticulum290.002805
RNA transport290.000742
Spliceosome280.004517
Purine metabolism250.00642
Aminoacyl-tRNA biosynthesis230
Pyrimidine metabolism220.001743
RNA polymerase100.034698
Plant hormone signal transduction160.955624
Ribosome160Down-regulated DEGs in R4B1
Porphyrin and chlorophyll metabolism50.000222
Photosynthesis40.002138