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Table 2 Genetic diversity and demographic characteristic of Begonia luzhaiensis based on EST-SSR markers and trnC-ycf6 spacer sequence

From: Phylogeography of Begonia luzhaiensis suggests both natural and anthropogenic causes for the marked population genetic structure

Population code n (SSR/cpDNA) SSR cpDNA
A r H s F is H o H e π h θw Haplotype (n)
East Guangxi
 Fuli (FL) 9/5 1.552 0.553 0.039 0.531 0.518 0.000 0.000 0.000 H2 (5)
 Gaotian (GT) 5/5 1.478 0.472 -0.106 0.522 0.429 0.000 0.000 0.000 H4 (5)
 Lingui (LG) 6/5 1.371 0.383 0.228 0.296 0.336 0.171 0.600 0.137 H3 (2), H5 (3)
 Xingping (XP) 13/9 1.266 0.266 0.080 0.245 0.255 0.000 0.000 0.000 H1 (9)
 Yongfu (YF) 18/6 1.261 0.264 0.212 0.208 0.251 0.000 0.000 0.000 H3 (6)
 Yangshuo (YS) 15/13 1.475 0.476 0.073 0.441 0.459 0.000 0.000 0.000 H2 (13)
Central Guangxi
 Luzhai (LZ) 20/12 1.482 0.487 0.187 0.396 0.455 0.000 0.000 0.000 H6 (12)
 Rongshui (RS) 15/14 1.326 0.328 0.142 0.282 0.313 0.000 0.000 0.000 H7 (14)
West Guangxi
 Bama (BM) 1/1 0.000 0.000 0.000 H8 (1)
 Donglan (DL) 1/2 0.142 1.000 0.142 H6 (1), H9 (1)
 Fengshan (FS) 1/1 0.000 0.000 0.000 H9 (1)
 Lingyun (LY) 35/35 1.236 0.237 0.201 0.189 0.232 0.000 0.000 0.000 H8 (35)
 Paoli (PL) 2/2 1.073 0.067 -0.500 0.094 0.055 0.000 0.000 0.000 H9 (2)
 Tian’e (TE) 4/3 1.245 0.266 0.569 0.115 0.212 0.000 0.000 0.000 H8 (3)
 Xincheng (XC) 20/18 1.294 0.295 0.101 0.265 0.285 0.000 0.000 0.000 H6 (18)
 Yizhou (YZ) -/1 0.000 0.000 0.000 H6 (1)
  1. n (SSR/cpDNA), number of individuals sampled for SSR/cpDNA; AR: mean allelic richness corrected for sample size; HS: gene diversity; FIS: inbreeding coefficient; HO: observed heterozygosity; HE: expected heterozygosity; π: nucleotide diversity; h: haplotype diversity