Fig. 6
The gene-to-gene network of Col-0 vs. P1/HCTu plants. The gene profiles of twofold DEGs between Col-0 and P1/HCTu plants were used to generate the Pearson correlation network. The different circle sizes indicate the numbers of correlated genes. A positive correlation (> 0.95) between the two genes is indicated by a red line, whereas a green line indicates a negative correlation (< −0.9). The red circles indicate the genes involved in calcium signaling and are grouped with a red background. The blue circles indicate the genes involved in the defense response and are grouped with a blue background. The green circles indicate the genes involved in the PTGS pathway and are grouped with a green background. The yellow circles indicate the genes that are the miRNA targets and are grouped with a yellow background. The gray circles indicate the genes involved in the JA, ABA, and ethylene biosynthesis pathways and are grouped with a gray background