Investigation of the effects of P1 on HC-pro-mediated gene silencing suppression through genetics and omics approaches

Hu, Sin-Fen; Wei, Wei-Lun; Hong, Syuan-Fei; Fang, Ru-Ying; Wu, Hsin-Yi; Lin, Pin-Chun; Sanobar, Neda; Wang, Hsin-Ping; Sulistio, Margo; Wu, Chun-Ta; Lo, Hsiao-Feng; Lin, Shih-Shun

doi:10.1186/s40529-020-00299-x

Botanical Studies

Table 1 The P1 interacting proteins

From: Investigation of the effects of P1 on HC-pro-mediated gene silencing suppression through genetics and omics approaches

AGI	Protein name	Description	Interacting with
AGI	Protein name	Description	P1^Tu	P1^Zy	P1^Te
AT4G29830	VIP3/SKI8	WD repeat-containing protein	+^a	+	+
AT5G61780	TSN2	Ribonuclease TUDOR 2	+
AT5G07350	TSN1	Ribonuclease TUDOR 1	+
AT3G13300	VSC	Varicose	+
AT2G15430	DdRp	DNA-directed RNA polymerases subunit 3	+
AT3G18165	MOS4	Modifier of SNC1,4	+
AT1G79280	NUA	Nuclear-pore anchor (NUA)	+
AT5G53480	Importin	Importin subunit beta-1	+
AT4G16143	Importin	Importin subunit alpha-2	+
AT3G43300	BIG5	Brefeldin A-inhibited guanine nucleotide-exchange protein 5	+
AT3G47810	VSP29	Vacuolar protein sorting-associated protein 29	+
AT5G24780	VSP1	Vegetative storage protein 1	+	+
AT1G52400		Beta-d-glucopyranosyl abscisate beta-glucosidase	+	+
AT1G53310		Phosphoenolpyruvate carboxylase 1	+	+
AT1G16460		Thiosulfate/3-mercaptopyruvate sulfurtransferase 2	+	+
AT3G27300		Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 1	+	+
AT2G23930		Probable small nuclear ribonucleoprotein G	+	+
AT2G31390		Probable fructokinase-1	+	+
AT3G62830		UDP-glucuronic acid decarboxylase 2	+	+
AT5G03630		Monodehydroascorbate reductase 2	+	+
AT3G52560		Ubiquitin-conjugating enzyme E2 variant 1D	+	+
AT1G64520		26S proteasome non-ATPase regulatory subunit 8 homolog A	+	+
AT1G08830	SOD1	Superoxide dismutse [Cu–Zn] 1	+		+
AT3G55620		Eukaryotic translation initiation factor 6-2	+		+
AT5G41220	GST	Glutathione S-transferase T3	+		+
AT4G24190		Endoplasmin homolog	+		+
AT5G42980		Thioredoxin H3	+		+
AT1G72730		Eukaryotic initiation factor 4A-3	+		+
AT1G77760		Nitrate reductase [NADH] 1	+		+
AT1G78370	GST	Glutathione S-transferase U20	+		+
AT3G61220		(+)-neomenthol dehydrogenase	+		+
AT3G06650		ATP-citrate synthase beta chain protein 1		+	+
AT5G49460		ATP-citrate synthase beta chain protein 2		+	+
AT5G44316		Putative UPF0051 protein ABCI9		+	+
AT3G44300		Nitrilase 2		+	+

^aThe protein was identified in the relevant P1 transgenic plants and marked as “+”

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