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Table 1 A list of 95 differential redox proteins in BvM14 roots between control and NaCl-treated groups

From: Quantitative redox proteomics revealed molecular mechanisms of salt tolerance in the roots of sugar beet monomeric addition line M14

No.

Protein IDa

Description

Abbreviation

Sequence with modificationb

Plant species

iodoTMT salt200/control ratioc

iodoTMT salt400/control ratiod

p-value

Protein locatione

Metabolism

Carbohydrate metabolism

1

A0A2H5P1K5

6-Phosphogluconate dehydrogenase, decarboxylating

PGDH

IC2SYAQGMNILR

Citrus unshiu

1.38

0.05

Chloroplast

2

731322678

Beta-fructofuranosidase, soluble isoenzyme I

β-FFase

NWFC4TDQSR

Beta vulgaris subsp. vulgaris

0.76

0.03

Vacuole

3

Q41140

Pyrophosphate–fructose 6-phosphate 1-phosphotransferase subunit alpha

PFP1

SLYKPELPPC10LQGTTVR

Ricinus communis

0.74

0.03

Cytoplasm

4

1108966238

Sucrose synthase isoform X2

SUS

LLPDAVGTTC10GQR

Beta vulgaris subsp. vulgaris

0.64

0.05

Chloroplast

5

731323052

Probable fructokinase-4

FRK

LLLVTLGDQGC11R

Beta vulgaris subsp. vulgaris

0.75

0.04

Cytoplasm

6

A0A0S3T1M9

UDP-glucose 6-dehydrogenase

UGDH

VFDC4MQKPAFVFDGR

Vigna angularis var. angularis

1.30

0.02

Cytoplasm

7

731364471

Trypsin inhibitor BvTI

TI

NPELPC6PYYITR

Beta vulgaris subsp. vulgaris

0.30

0.04

Extracellular

8

731344067

Kunitz trypsin inhibitor 1-like

KTI

C1PYYSVVQSQDDR

Beta vulgaris subsp. vulgaris

1.50

0.01

Vacuole

9

731331165

Alpha-amylase/trypsin inhibitor

α-TI

ANGGC5NNAYNYSYSR

Beta vulgaris subsp. vulgaris

0.52

0.49

0.01

Extracellular

Amino acid metabolism

10

731353768

Aspartate aminotransferase

AST

VASAQC6LSGTGSLR

Beta vulgaris subsp. vulgaris

1.20

0.03

Cytoplasm

11

A0A2P5X5J0

Aspartate aminotransferase

AST

IAAVQALSGTGAC13R

Gossypium barbadense

1.26

0.04

Cytoplasm

12

731351009

Aspartic proteinase A1-like

AP

VGEGPAAQC9ISGFTALDVPPPR

Beta vulgaris subsp. vulgaris

1.35

0.02

Vacuole

13

731353609

3-Hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isoform X1

H2BCH

C1VLIESSSPR

Beta vulgaris subsp. vulgaris

1.21

0.01

Mitochondrial

14

A0A2I0XB93

Aspartate-semialdehyde dehydrogenase

ASDH

IRQDLSQEGNHGLDIFVC18GDQIR

Dendrobium catenatum

1.41

0.02

Cytoplasm

15

A0A0M3TGF7

Acetolactate synthase

ALS

C1GISDVFAYPGGASMEIHQALTR

Poa annua

1.33

0.03

Chloroplast

16

731325199

Serine hydroxymethyl transferase 4

SHMT

MLIC4GGSAYPR

Beta vulgaris subsp. vulgaris

0.59

0.04

Cytoplasm

17

731317741

LL-diaminopimelate aminotransferase, chloroplastic

DAPL

TELIFFC7SPNNPTGAAATR

Beta vulgaris subsp. vulgaris

0.80

0.05

Chloroplast

18

A0A0K9RN52

Glutamate-1-semialdehyde 2,1-aminomutase

GSAM

FVNSGTEAC9MGVLR

Spinacia oleracea

1.21

0.00

Chloroplast

Other metabolism

19

A0A0B2RAS0

Proteasome subunit alpha type-5

PSAM5

FSYGEPMTVESTTQAIC17DLALR

Glycine soja

0.76

0.05

Nucleus

20

731363918

Proteasome subunit alpha type-5

PSAM5

FSYGEPMTVESTTQALC17DLALR

Beta vulgaris subsp. vulgaris

1.24

0.00

Nucleus

21

731361751

Proteasome subunit alpha type-5

PSAM5

FSYGEPMNVESTTQALC17DLALR

Beta vulgaris subsp. vulgaris

1.46

0.03

Nucleus

22

A0A287HDI6

Proteasome subunit beta type-6

PSAM6

QLTDNVYVC9R

Hordeum vulgare subsp. vulgare

1.23

1.57

0.05

Nucleus

23

M0UCJ4

ATP synthase subunit beta

ATPsny

VC2QVIGAVVDVR

Musa acuminata subsp. malaccensis

0.74

0.04

Mitochondrion

24

M8C108

ATP synthase subunit alpha, mitochondrial

ATPsny

MTNFC5TNFQVDEIGR

Aegilops tauschii

1.76

0.01

Mitochondrial

ROS homeostasis

25

A0A287X935

Peroxidase

POD

ASVEAVC7PGVVSC13ADILAITAR

Hordeum vulgare subsp. vulgare

2.13

0.01

Extracellular

26

A0A2G9HTZ9

Peroxidase

POD

QAVEAQC7PGVVSC13SDILAIAAR

Handroanthus impetiginosus

2.05

0.01

Extracellular

27

A0A1S2YYJ3

Peroxidase

POD

SDLENAC7PSTVSC13ADILTLAAR

Cicer arietinum

1.70

0.01

Extracellular

28

A0A2G2WVY9

Peroxidase

POD

IKTMC5PGAAVSC12ADILALAAR

Capsicum baccatum

0.46

0.05

Extracellular

29

J3L3F3

Peroxidase

POD

LEAAC5PKTVSC11ADILALAAR

Oryza brachyantha

1.65

0.01

Extracellular

30

A0A0J8CS88

Peroxidase

POD

QC2PAGNAGANIVVPMDPISPTISDTAYYR

Beta vulgaris subsp. vulgaris

1.50

0.04

Extracellular

31

731316487

Peroxidase 4

POD4

TC2PQLFPTIR

Beta vulgaris subsp. vulgaris

0.56

0.01

Extracellular

32

731313635

Peroxidase 12

POD12

VVSC4ADITSLAAR

Beta vulgaris subsp. vulgaris

0.42

0.05

Extracellular

33

731313633

Peroxidase 12

POD12

VVSC4ADITTLAAR

Beta vulgaris subsp. vulgaris

0.69

0.04

Extracellular

34

731313639

Peroxidase 12

POD12

VVSC4ADLTALAAR

Beta vulgaris subsp. vulgaris

0.64

0.03

Vacuole

35

A0A0A9MG34

Peroxidase 72

POD72

AALEAAC7PSTVSC13ADILALTAR

Arundo donax

1.55

0.05

Extracellular

36

731337443

Peroxidase 72

POD72

AAVEQAC7PHTVSC13ADILALTAR

Beta vulgaris subsp. vulgaris

2.32

0.03

Extracellular

37

731331163

Protein P21

P21

TDNYC5C6NSGSC11GPTDYSR

Beta vulgaris subsp. vulgaris

4.09

1.44

0.02

Extracellular

38

A0A1S3TTL2

DSBA domain-containing protein

DSBA

NVGLEYC7MSGLTGNTIDSHR

Vigna radiata var. radiata

0.55

1.63

0.04

Chloroplast

39

731339890

EG45-like domain containing protein 2

EG45

VTDLC5DSC8AGDLNLSQEAFNVIADTR

Beta vulgaris subsp. vulgaris

0.44

0.00

Extracellular

40

731352762

EG45-like domain containing protein

EG45

VTC3VSGTNQGVPQPC15R

Beta vulgaris subsp. vulgaris

1.32

0.04

Extracellular

41

A0A0J8B2W2

Fe2OG dioxygenase domain-containing protein

Fe2OG

VAIYPEC7PNPELVR

Beta vulgaris subsp. vulgaris

0.59

0.02

Cytoplasm

42

M0RV51

Glutathione S-transferase DHAR2

GST

AAVGAPDVLGDC12PFSQR

Musa acuminata subsp. malaccensis

0.64

0.01

Cytoplasm

43

A0A199UJ48

3-Ketoacyl-CoA thiolase 2, peroxisomal

HT

IELFAQARDC10LLPMGITSENVAHR

Ananas comosus

1.45

0.00

Peroxisome

44

731355863

l-Ascorbate oxidase-like

AOX

QLGTPWADGTASISQC16PINPGETFTYR

Beta vulgaris subsp. vulgaris

0.51

1.58

0.01

Plasma Membrane

45

A0A151QMI1

Nitrate reductase [NADH] 2

NR

QSGALHVC8FEGAEDLPGGGGSKYGTSVTR

Cajanus cajan

1.54

0.00

Peroxisome

46

731357289

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B

NADH

C1VFSLLR

Beta vulgaris subsp. vulgaris

1.29

0.04

Mitochondrion

47

731359814

Peptide methionine sulfoxide reductase B5-like

MSR

FDSGC5GWPAFYEGLPGAITR

Beta vulgaris subsp. vulgaris

0.75

0.02

Cytoplasm

48

731312054

Cysteine protease RD19A

RD19A

LVSLSEQQLVDC12DHEC16DPEER

Beta vulgaris subsp. vulgaris

1.63

0.04

Vacuole

Stress and defense

49

731330989

Probable polygalacturonase

PGs

VIDNFEYSAINC12R

Beta vulgaris subsp. vulgaris

1.5

0.04

Plasma Membrane

50

731338906

PLAT domain-containing protein 3

PITI

GPC3LNAPVC9AMR

Beta vulgaris subsp. vulgaris

1.26

0.01

Vacuole

51

A0A166FTZ6

Heat shock cognate 70 kDa protein

Hsp70

MDIC4SVHDVVLVGGSTR

Daucus carota subsp. sativus

1.21

0.05

Endoplasmic reticulum

52

Q9XFW7

Chitinase

FGFC4GSTDAYC11GEGC15R

Beta vulgaris subsp. vulgaris

2.05

0.01

Extracellular

53

731352263

Endochitinase EP3

EP3

VGYYTQYC8QQLGVSPGNNLR

Beta vulgaris subsp. vulgaris

0.65

0.02

Cell Wall

54

731352251

Endochitinase EP3

EP3

AINGGEC7GGGNTPAVNAR

Beta vulgaris subsp. vulgaris

0.45

0.00

Cell Wall

55

731352259

Endochitinase EP3

EP3

LEC3DGGNPATVNAR

Beta vulgaris subsp. vulgaris

0.71

0.01

Cell Wall

56

731329194

Pathogenesis-related protein PR-4

PR-4

NQYGWTAFC9GPAGPTGQASC20GR

Beta vulgaris subsp. vulgaris

1.64

0.01

Cytoplasm

57

731326017

Jasmonate-induced protein homolog

JIP

LDASHDESHC10PGAAAR

Beta vulgaris subsp. vulgaris

1.33

0.02

Cell wall

58

731332586

Jasmonate-induced protein homolog

JIP

LENSGNC7SYDVDYETR

Beta vulgaris subsp. vulgaris

0.36

0.04

Cell wall

59

731312253

Jasmonate-induced protein homolog

JIP

C1GPAAEFNNVNWTQVR

Beta vulgaris subsp. vulgaris

1.49

0.00

Cell wall

60

A0A2P4NB14

Flavonoid 3′,5′-methyltransferase

GIP

IESSLLSIGDGITLC15R

Quercus suber

1.33

0.02

Cytoplasm

61

731357526

lysM domain-containing GPI-anchored protein 2

 

STC3AYVGYNR

Beta vulgaris subsp. vulgaris

0.53

0.01

Plasma Membrane

Transport

62

A0A0K9RCQ9

Purple acid phosphatase

PAP

FLEEC5LASANR

Spinacia oleracea

0.40

0.03

Extracellular

63

731352863

Probable inactive purple acid phosphatase 29

PAP

QEEVIC6PGVNSGFFDTMR

Beta vulgaris subsp. vulgaris

0.68

0.75

0.01

Extracellular

64

731320622

Importin subunit alpha

IMP

NATWTLSNFC10R

Beta vulgaris subsp. vulgaris

1.21

0.03

Nucleus

65

A0A061E090

Vaculolar sorting receptor 3 isoform 1

VSR

VC2EC4PLVDGVQFR

Theobroma cacao

0.70

0.02

Golgi apparatus

66

731352092

Vacuolar-sorting receptor 4

VSR

YC2APDPEQDFSR

Beta vulgaris subsp. vulgaris

0.61

0.02

Golgi apparatus

67

A0A2N9HVW5

Mitochondrial import receptor subunit TOM40-1-like protein

TOM40

EEEKVDYFNLPC12PIPYEEIHR

Fagus sylvatica

1.81

0.02

Mitochondrion

Cellular structure

68

731336429

Actin-depolymerizing factor

ADP

TGTPAESYDDFLAVLPGNDC20R

Beta vulgaris subsp. vulgaris

0.76

0.01

Extracellular

69

731320854

Actin-depolymerizing factor

ADP

TGGPAESYDDFLASLPESDC20R

Beta vulgaris subsp. vulgaris

0.76

0.02

Extracellular

70

731375712

Basic 7S globulin

Bg7s

TIAPFNVC8VDPSTFPASR

Beta vulgaris subsp. vulgaris

10.20

5.10

0.04

Plasma Membrane

71

731317399

Profilin-3

Pfn

TGQALVIGLYDEPVTPGQC19NMIVER

Beta vulgaris subsp. vulgaris

1.29

0.03

Cytoplasm

72

A4GDT3

Profilin-1

Pfn

TGQALVFGIYEESVTPGQC19NMVVER

Olea europaea

1.53

0.01

Cytoplasm

73

731354018

Profilin

Pfn

TGQALVFGIYDEPVAPGQC19NMVVER

Beta vulgaris subsp. vulgaris

1.40

0.03

Cytoplasm

Signal transduction

74

731337809

Protein TAPETUM DETERMINANT 1

TPD

C1LGFSTVQPVNPR

Beta vulgaris subsp. vulgaris

1.50

0.01

Plasma Membrane

75

731357482

Ubiquitin domain-containing protein DSK2b

DSK2b

SLVAQNC7DVPAEQQR

Beta vulgaris subsp. vulgaris

0.74

0.05

Nucleus

76

A0A287MC57

Ubiquitin-like domain-containing protein

Uds

LMNAYC6DR

Hordeum vulgare subsp. vulgare

0.80

0.00

Nucleus

77

731354496

Ribosome-inactivating protein PD-L1/PD-L2

Ubls

NQVEAPIRIC10GLPSTR

Beta vulgaris subsp. vulgaris

2.04

0.01

Cytoplasm

78

731345483

Auxin-binding protein ABP19a

ABP

GPEGYAC7RDPATLTTDDFVYTGFR

Beta vulgaris subsp. vulgaris

0.42

0.02

Cell wall

79

A0A2K1KH59

Protein kinase domain-containing protein

AMPK

C1IPYLTR

Physcomitrium patens

0.76

0.04

Cytoplasm

80

731370564

Receptor-like serine/threonine-protein kinase SD1-8 isoform X1

RIPK

TAFVNDGLNLDQC13R

Beta vulgaris subsp. vulgaris

0.70

0.01

Plasma Membrane

81

731348205

Cell wall/vacuolar inhibitor of fructosidase 1

C/VIF1

FGEQAMVDAGNEAEGC16R

Beta vulgaris subsp. vulgaris

1.43

0.02

Vacuole

Transcription

82

731323512

Transcription elongation factor TFIIS

TFIIS

IC2NLTAEEMASEQR

Beta vulgaris subsp. vulgaris

0.62

0.02

Nucleus

83

731358684

Glycine-rich RNA-binding protein

RBP

C1FVGGLAWATDDR

Beta vulgaris subsp. vulgaris

0.72

0.01

Cytoplasm

84

731363127

KH domain-containing protein

KHP

IGETVPGC8DER

Beta vulgaris subsp. vulgaris

0.76

0.03

Nucleus

85

731317968

RNA-binding KH domain-containing protein PEPPER

RBP

VSGVGDVEGSADAAAYC17SIR

Beta vulgaris subsp. vulgaris

1.24

0.04

Nucleus

86

A0A1D1Z0S0

U6 snRNA-associated Sm-like protein LSm7

SLGLIVC7R

Anthurium amnicola

1.26

0.00

Nucleus

87

A0A0C9S8X9

Transcribed RNA sequence

C1GNVNFSFR

Wollemia nobilis

1.72

0.01

Cytoplasm

Biosynthesis

88

A0A0J8C157

Eukaryotic translation initiation factor 6

eIF6

NC2LPDSVVVQR

Beta vulgaris subsp. vulgaris

0.72

0.02

Nucleus

89

731369461

Eukaryotic translation initiation factor 3 subunit D

eIF3

C1ELQSALDINNQR

Beta vulgaris subsp. vulgaris

1.27

0.03

Cytoplasm

90

1108926884

Elongation factor Tu, chloroplastic

EF-TU

MEVELIHPVAC11EEGMR

Beta vulgaris subsp. vulgaris

0.80

0.03

Cytoplasm

Photosynthesis

91

731341540

Uclacyanin-3-like

AQNYVATAVQPC12C13QGISDAINNER

Beta vulgaris subsp. vulgaris

0.64

0.00

Plasma Membrane

92

731349464

Ferredoxin, root R-B1

Fd

LIGPDGQVSEFDAPDDC17YILDSAENEGVEIPYSC34R

Beta vulgaris subsp. vulgaris

0.61

0.02

Chloroplast

Unknown

93

M1DDJ2

Uncharacterized protein

QSHMSLSFSILITELC16QR

Solanum tuberosum

1.63

0.00

Cytoplasm

94

B9T2R9

Clp R domain-containing protein

CLP

INSC4ISIEPSLR

Ricinus communis

1.24

0.01

Cytoplasm

95

M8AU58

Uncharacterized protein

MTPTTLAC8IGAAAETALPPTHPLR

Aegilops tauschii

1.53

0.04

Cytoplasm

  1. aProtein ID, gi number of NCBI
  2. bSequence with modification, the lower case letter are phosphorylation site in each peptide
  3. ciodoTMT salt200/control Ratio, a relative abundance of proteins at redox peptide level (200 mM NaCl treatment versus control), P-value < 0.05
  4. diodoTMT salt400/control Ratio, a relative abundance of proteins at redox peptide level (400 mM NaCl treatment versus control), P-value < 0.05
  5. eProtein location, refer to subcellular location prediction website (YLoc, LocTree3, ngLOC, TargetP)