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Table 2 List of the annotated genes in the chloroplast genomes of Veronicastrum wulingense

From: Veronicastrum wulingense (Plantaginaceae), a new species from Southwestern Hubei, China

Category

Groups of genes

Name of genes

Self-replication

Ribosomal RNA

rrn4.5 c, rrn5 c, rrn16 c, rrn23 c

Transfer RNA

trnA-UGC a,c, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnG-UCC a, trnH-GUG, trnI-CAU c, trnI-GAU a,c, trnK-UUU a, trnL-CAA c, trnL-UAA a, trnL-UAG, trnM-CAU, trnfM-CAU, trnN-GUU c, trnP-UGG, trnQ-UUG, trnR-UCU, trnR-ACG c, trnS-UGA, trnS-GCU, trnS-GGA, trnT-GGU, trnT-UGU, trnV-UAC a, trnV-GAC c, trnW-CCA, trnY-GUA

Small subunit of ribosome

rps2, rps3, rps4, rps7 c, rps8, rps11, rps12 a,c, rps14, rps15, rps16 a, rps18, rps19

Large subunit of ribosome

rpl2 a,c, rpl14, rpl16 a, rpl20, rpl22, rpl23 c, rpl32, rpl33, rpl36

RNA polymerase subunits

rpoA, rpoB, rpoC1 a, rpoC2

Photosynthesis

Photosystem I

psaA, psaB, psaC, psaI, psaJ

Photosystem II

psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ

Subunits of cytochrome

petA, petB a, petD a, petG, petL, petN

ATP synthase

atpA, atpB, atpE, atpF a, atpH, atpI

NADH-dehydrogenase

ndhA a, ndhB a,c, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK

Other genes

Rubisco large subunit

rbcL

Translational initiation factor

infA

Maturase K

matK

Envelope membrane protein

cemA

Acetyl-CoA carboxylase

accD

Proteolysis

clpP b

Cytochrome c biogenesis

ccsA

Unknown

Conserved open reading frames

ycf1, ycf2 c, ycf3 b, ycf4, ycf15 c

  1. aGenes with one intron
  2. bGenes with two introns
  3. c Two gene copied in IR regions