Skip to main content
Botanical Studies

Table 3 Mold and yeast species present at frequencies > 1% of the total number of reads (metabarcoding) or total number of colonies (serial dilutions) in at least one cellar

From: Fungal communities on alpine cheese rinds in Southern Switzerland

Number of days between production and sampling

Cellar

A

B

C

D

E

29

29

23

35

31

Taxon

M

S

M

S

M

S

M

S

M

S

Yeasts

 Candida parapsilosis

 

2.3

        

 Debaryomyces coudertii1

7.27

 

19.79

 

0.75

 

14.58

 

9.63

 

 D. hansenii

 

9.3

 

45.4

   

26

  

 D. prosopidis1

61.80

 

64.01

 

1.89

 

35.83

 

35.83

 

 Trichosporon coremiiforme

   

2.4

      

Filamentous fungi

 Mucor lanceolatus

3.64

 

2.06

2.4

86.79

70.6

0.41

2

1.60

3.3

 M. plumbeus

  

2.31

 

0.38

     

 M. racemosus

   

22.7

 

2.9

    

 Penicillium biforme

 

74.5

 

6.8

 

2.9

 

42

 

93.4

 P. chrysogenum/rubens

 

11.6

 

20.4

 

20.7

 

22

  

 P. concentricum

  

0.26

   

2.08

 

2.14

 

 P. flavigenum

3.64

   

0.38

 

6.25

 

5.88

 

 P. salamii

       

2

  

 P. thymicola

14.55

 

1.28

 

2.64

 

20.00

 

20.85

 

 Penicillium sp.

         

3.3

Unidentified species

 

2.3

0.77

 

0.37

2.9

2.91

6

4.28

 
  1. Values are expressed as percentages of the total number of isolates or reads, respectively. M: metabarcoding; S: serial dilution. A: Bolla and Carassina; B: Bresciana; C: Campo la Torba; D: Formazzora; E: Pontino. Database used for the metabarcoding identification: UNITE. 1Debaryomyces coudertii and D. prosopidis have been identified by ITS, but ITS cannot distinguish them from D. hansenii (Martorell et al. 2005; Nguyen et al. 2009). D. hansenii has been identified by sequencing and MALDI-TOF MS
Back to article page