Redisposition of apiosporous genera Induratia and Muscodor in the Xylariales, following the discovery of an authentic strain of Induratia apiospora

Cedeño-Sanchez, Marjorie; Schiefelbein, Rahel; Stadler, Marc; Voglmayr, Hermann; Bensch, Konstanze; Lambert, Christopher

doi:10.1186/s40529-023-00372-1

Botanical Studies

Table 1 Feature table listing all sequences used for molecular phylogenetic inference. GenBank sequence accession numbers, type status of taxa, country of origin and specimen/strain numbers are given in the respective columns

From: Redisposition of apiosporous genera Induratia and Muscodor in the Xylariales, following the discovery of an authentic strain of Induratia apiospora

Species	Specimen or strain number	Origin	Status	GenBank accession numbers				References
Species	Specimen or strain number	Origin	Status	ITS	LSU	rpb2	tub2	References
Albicollum longisporum	CBS 147283	Spain	HT	ON869286	ON869286	ON808465	ON808509	Voglmayr et al. (2022)
Albicollum vincensii	CBS 147286	Austria	ET	ON869297	ON869297	ON808475	ON808519	Voglmayr et al. (2022)
Amphirosellinia nigrospora	HAST 91092308	Taiwan	HT	GU322457	N/A	GQ848340	GQ495951	Hsieh et al. (2010)
Annulohypoxylon truncatum	CBS 140778	Texas	ET	KY610419	KY610419	KY624277	KX376352	Kuhnert et al. (2017), Wendt et al. (2018)
Anthostomelloides krabiensis	MFLUCC 15–0678	Thailand	HT	KX305927	KX305928	KX305929	N/A	Tibpromma et al. (2017)
Astrocystis concavispora	MFLUCC 14–0174	Italy		KP297404	KP340545	KP340532	KP406615	Daranagama et al. (2015)
Barrmaelia macrospora	CBS 142768	Austria	ET	KC774566	KC774566	MF488995	MF489014	Voglmayr et al. (2018)
Barrmaelia moravica	CBS 142769	Austria	ET	MF488987	MF488987	MF488996	MF489015	Voglmayr et al. (2018)
Barrmaelia oxyacanthae	CBS 142770	Austria		MF488988	MF488988	MF488997	MF489016	Voglmayr et al. (2018)
Barrmaelia rappazii	CBS 142771	Norway	HT	MF488989	MF488989	MF488998	MF489017	Voglmayr et al. (2018)
Barrmaelia rhamnicola	CBS 142772	France	ET	MF488990	MF488990	MF488999	MF489018	Voglmayr et al. (2018)
Biscogniauxia marginata	MFLUCC 12–0740	France		KJ958407	KJ958408	KJ958409	KJ958406	Daranagama et al. (2015)
Camillea obularia	ATCC 28093	Puerto Rico		KY610384	KY610429	KY624238	KX271243	Wendt et al. (2018)
Clypeosphaeria mamillana	CBS 140735	France	ET	KT949897	KT949897	MF489001	MH704637	Jaklitsch et al. (2016), Voglmayr et al. (2018), Liu et al. (2019)
Collodiscula japonica	CBS 124266	China		JF440974	JF440974	KY624273	KY624316	Jaklitsch and Voglmayr (2011), Wendt et al. (2018)
Creosphaeria sassafras	STMA 14087	Argentina		KY610411	KY610468	KY624265	KX271258	Wendt et al. (2018)
Daldinia concentrica	CBS 113277	Germany		AY616683	KY610434	KY624243	KC977274	Triebel et al. (2005), Kuhnert et al. (2014), Wendt et al. (2018)
Dematophora necatrix	CBS 349.36	Argentina		AY909001	KF719204	KY624275	KY624310	Pelaez et al. (2008), Wendt et al. (2018)
Diatrype disciformis	CBS 197.49	Netherlands		N/A	DQ470964	DQ470915	N/A	Zhang et al. (2006)
Digitodochium amoenum	CBS 147285	Austria	ET	ON869303	ON869303	ON808481	ON808525	Voglmayr et al. (2022)
Emarcea castanopsidicola	CBS 117105	Thailand	HT	AY603496	MK762717	MK791285	MK776962	Duong et al. (2004), Samarakoon et al. (2020)
Emarcea eucalyptigena	CBS 139908	Malaysia	HT	KR476733	MK762718	MK791286	MK776963	Crous et al. (2015), Samarakoon et al. (2020)
Entalbostroma erumpens	ICMP 21152	New Zealand	HT	KX258206	N/A	KX258204	KX258205	Johnston et al. (2016)
Entoleuca mammata	100 J.D.R	France		GU300072	N/A	GQ844782	GQ470230	Hsieh et al. (2010)
Entonaema liquescens	ATCC 46302	USA		KY610389	KY610443	KY624253	KX271248	Wendt et al. (2018)
Entosordaria perfidiosa	CBS 142773	Austria	ET	MF488993	MF488993	MF489003	MF489021	Voglmayr et al. (2018)
Entosordaria quercina	CBS 142774	Greece	HT	MF488994	MF488994	MF489004	MF489022	Voglmayr et al. (2018)
Eutypa lata	UCR-EL1	USA		JGI	JGI	JGI	JGI
Graphostroma platystomum	CBS 270.87	France		JX658535	DQ836906	KY624296	HG934108	Zhang et al. (2006), Stadler et al. (2014), Koukol et al. (2015), Wendt et al. (2018)
Hypocreodendron sanguineum	J.D.R. 169	Mexico		GU322433	N/A	GQ844819	GQ487710	Hsieh et al. (2010)
Hypomontagnella monticulosa	MUCL 54604	French Guiana	ET	KY610404	KY610487	KY624305	KX271273	Wendt et al. (2018)
Hypoxylon fragiforme	MUCL 51264	Germany	ET	KC477229	KM186295	KM186296	KX271282	Stadler et al. (2013), Daranagama et al. (2015), Wendt et al. (2018)
Induratia apiospora	ATCC 60639	New Zealand	HT	OP862879	OP862881	OP879469	OP879468	This study
Jackrogersella multiformis	CBS 119016	Germany	ET	KC477234	KY610473	KY624290	KX271262	Kuhnert et al. (2014), Kuhnert et al. (2017), Wendt et al. (2018)
Kretzschmaria deusta	CBS 163.93	Germany		KC477237	KY610458	KY624227	KX271251	Stadler et al. (2013), Wendt et al. (2018)
Leptomassaria simplex	CBS 147282	Austria	ET	ON869305	ON869305	ON808483	ON808527	Voglmayr et al. (2022)
Linosporopsis ischnotheca	CBS 145761	Switzerland	ET	MN818952	MN818952	MN820708	MN820715	Voglmayr and Beenken (2020)
Linosporopsis ochracea	CBS 145999	Germany	ET	MN818958	MN818958	MN820714	MN820721	Voglmayr et al. (2022)
Lopadostoma turgidum	CBS 133207	Austria	ET	KC774618	KC774618	KC774563	MF489024	Jaklitsch et al. (2014), Voglmayr et al. (2018)
Muscodor albus	9-6	N/A		HM034857	HM034865	N/A	HM034844	Zhang et al. (2010)
Muscodor albus	MONT 620		HT	AF324336	N/A	N/A	N/A	Worapong et al. (2001)
Muscodor brasiliensis	LGMF 1256		HT	KY924494	N/A	MF510171	N/A	Pena et al. (2019)
Muscodor camphorae	NFCCI 3236		HT	KC481681	N/A	N/A	N/A	Meshram et al. (2017)
Muscodor cinnanomi	BCC 38842		HT	GQ848369	N/A	N/A	N/A	Suwannarach et al. (2010)
Muscodor coffeanum	COAD 1842	Brazil	HT	KM514680	N/A	KP862881	N/A	Hongsanan et al. (2015)
Muscodor crispans	MONT 2347		HT	EU195297	N/A	N/A	N/A	Mitchell et al. (2008)
Muscodor darjeelingensis	NFCCI 3095		HT	JQ409997	N/A	N/A	N/A	Saxena et al. (2014)
Muscodor equiseti	JCM 18233		HT	JX089322	N/A	N/A	N/A	Suwannarach et al. (2013)
Muscodor fengyangensis	CGMCC 2862	China	HT	HM034856	HM034859	HM034849	HM034843	Zhang et al. (2010)
Muscodor ghoomensis	NFCCI 3234		HT	KF537625	N/A	N/A	N/A	Meshram et al. (2015)
Muscodor indicus	NFCCI 3235		HT	KF537626	N/A	N/A	N/A	Meshram et al. (2015)
Muscodor kashayum	NFCCI 2947		HT	KC481680	N/A	N/A	N/A	Meshram et al. (2013)
Muscodor musae	JCM 18230		HT	JX089323	N/A	N/A	N/A	Suwannarach et al. (2013)
Muscodor oryzae	JCM 18231		HT	JX089321	N/A	N/A	N/A	Suwannarach et al. (2013)
Muscodor roseus	MONT 2098		HT	AH010859	N/A	N/A	N/A	Worapong et al. (2002)
Muscodor sp.	SMH 1255			MN250031	AY780069	N/A	AY780119	Miller and Huhndorf (2005), Samarakoon et al. (2020)
Muscodor strobelii	NFCCI 2907		HT	JQ409999	N/A	N/A	N/A	Meshram et al. (2014)
Muscodor suthepensis	JCM 18232		HT	JN558830	N/A	N/A	N/A	Suwannarach et al. (2013)
Muscodor suturae	MSUB 2380		HT	JF938595	N/A	N/A	N/A	Kudalkar et al. (2012)
Muscodor thailandica	MFLUCC 17-2669	Thailand	HT	MK762707	MK762714	MK791283	MK776960	Samarakoon et al. (2020)
Muscodor tigerensis	NFCCI 3172		HT	JQ409998	N/A	N/A	N/A	Saxena et al. (2015)
Muscodor vitigenus	MONT P-15		HT	AY100022	N/A	N/A	N/A	Daisy et al. (2002)
Muscodor yucatanensis	MEXU 25511		HT	FJ917287	N/A	N/A	N/A	González et al. (2009)
Muscodor yunnanensis	CGMCC 3.18908	China	HT	MG866046	MG866038	MG866059	MG866066	Chen et al. (2019)
Muscodor ziziphi	MFLUCC 17-2662	Thailand	HT	MK762705	MK762712	MK791281	MK776958	Samarakoon et al. (2020)
Magnostiolata mucida	MFLU 19-2133	Thailand	HT	MW240673	MW240603	MW658652	MW775618	Samarakoon et al. (2020)
Nemania ethancrensonii	CBS 148337	USA	HT	ON869311	ON869311	ON808489	ON808533	Voglmayr et al. (2022)
Nemania primolutea	HAST 91102001	Taiwan	HT	EF026121	N/A	GQ844767	EF025607	Hsieh et al. (2010)
Nemania uda	CBS 148422	Austria		ON869312	ON869312	ON808488	ON808532	Voglmayr et al. (2022)
Obolarina dryophila	MUCL 49882	France		GQ428316	GQ428316	KY624284	GQ428322	Pažoutová et al. (2010), Wendt et al. (2018)
Occultitheca rosae	HKAS 102393	China	HT	MW240672	MW240602	MW658651	MW775617	Samarakoon et al. (2020)
Oligostoma insidiosum	CBS 147288	Switzerland	ET	ON869314	ON869314	ON808491	ON808535	Voglmayr et al. (2022)
Podosordaria mexicana	WSP 176	Mexico		GU324762	N/A	GQ853039	GQ844840	Hsieh et al. (2010)
Poronia punctata	CBS 656.78	Australia	HT	KT281904	KY610496	KY624278	KX271281	Senanayake et al. (2015), Wendt et al. (2018)
Pyrenopolyporus hunteri	MUCL 52673	Ivory Coast	ET	KY610421	KY610472	KY624309	KU159530	Kuhnert et al. (2017), Wendt et al. (2018)
Rhopalostroma angolense	CBS 126414	Ivory Coast		KY610420	KY610459	KY624228	KX271277	Wendt et al. (2018)
Rosellinia corticium	MUCL 51693	France		KY610393	KY610461	KY624229	KX271254	Wendt et al. (2018)
Rostrohypoxylon terebratum	CBS 119137	Thailand	HT	DQ631943	DQ840069	DQ631954	DQ840097	Tang et al. (2007), Fournier et al. (2011)
Ruwenzoria pseudoannulata	MUCL 51394	D. R. Congo	HT	KY610406	KY610494	KY624286	KX271278	Wendt et al. (2018)
Sarcoxylon compunctum	CBS 359.61	South Africa		KT281903	KY610462	KY624230	KX271255	Senanayake et al. (2015), Wendt et al. (2018)
Spiririma gaudefroyi	CBS 147284	Spain	ET	ON869320	ON869320	ON808497	ON808541	Voglmayr et al. (2022)
Stilbohypoxylon elaeicola	Y.M.J. 173	French Guiana		EF026148	N/A	GQ844826	EF025616	Hsieh et al. (2010)
Stromatoneurospora phoenix	BCC 82040	Thailand		MT735133	MT735133	MT742605	MT700438	Becker et al. (2020)
Thamnomyces dendroideeus	CBS 123578	French Guiana		FN428831	KY610467	KY624232	KY624313	Stadler et al. (2010), Wendt et al. (2018)
Xylaria apoda	HAST 90080804	Taiwan		GU322437	N/A	GQ844823	GQ495930	Hsieh et al. (2010)
Xylaria arbuscula	CBS 126415	Germany		KY610394	KY610463	KY624287	KX271257	Fournier et al. (2011), Wendt et al. (2018)
Xylaria atrosphaerica	HAST 91111214	Taiwan		GU322459	N/A	GQ848342	GQ495953	Hsieh et al. (2010)
Xylaria digitata	HAST 919	Ukraine		GU322456	N/A	GQ848338	GQ495949	Hsieh et al. (2010)
Xylaria hypoxylon	CBS 122620	Sweden	ET	KY610407	KY610495	KY624231	KX271279	Sir et al. (2016b), Wendt et al. (2018)
Xylaria ianthinovelutina	HAST 553	French West Indies		GU322441	N/A	GQ844828	GQ495934	Hsieh et al. (2010)
Xylaria laevis	HAST 419	French West Indies		GU324746	N/A	GQ848359	GQ502695	Hsieh et al. (2010)
Xylaria longipes	CBS 148.73	Germany		MH860649	MH872351	KU684280	KU684204	Vu et al. (2019), U'Ren et al. (2016)
Xylaria oxyacanthae	J.D.R. 859	USA		GU322434	N/A	GQ844820	GQ495927	Hsieh et al. (2010)
Xylaria polymorpha	MUCL 49884	France		KY610408	KY610464	KY624288	KX271280	Wendt et al. (2018)

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