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Table 1 Statistics of ginger transcriptome data

From: Transcriptome profiles reveal gene regulation of ginger flowering induced by photoperiod and light quality

Sample

Raw reads

Clean reads

Tatal Mapped

Multiple mapped

Q30

GC content

FI1

FI2

FI3

44,582,118

42,945,294

43,894,564

43,627,860

41,428,602

42,428,512

40,657,844 (93.19%)

38,887,172(93.87%)

39,982,225 (94.23%)

1,175,032 (2.69%)

1,230,258 (2.97%)

1,182,543 (2.87%)

94.34%

94.56%

94.88%

48.23%

49.57%

48.96%

LI1

LI2

LI3

42,635,092

42,281,372

42,123,265

41,560,670

40,330,888

40,930,555

38,993,816 (93.82%)

37,712,828 (93.51%)

37,899,887 (92.60%)

1,124,250 (2.71%)

1,171,920 (2.91%)

1,162,547 (2.85%)

94.37%

94.61%

94.12%

48.58%

47.64%

48.21%

LN1

LN2

LN3

51,254,400

45,530,676

47,165,454

50,189,780

44,569,834

46,655,888

47,096,494 (93.84%)

41,882,894 (93.97%)

42,255,885 (90.56%)

1,369,568 (2.73%)

1,205,616 (2.71%)

1,269,853 (2.72%)

94.59%

94.82%

94.49%

48.03%

48.97%

49.25%

  1. FI1–FI3: potential flower bud of ginger under induced by photoperiod and light quality; LI1–LI3: induction treatment of ginger leaf bud; LN1–LN3: leaf bud of ginger under natural condition