Skip to main content

Table 1 Size of exonic/intronic regions and consensus sequences of splicing sites of the SaSTT3A and SaSTT3B

From: Two conserved oligosaccharyltransferase catalytic subunits required for N-glycosylation exist in Spartina alterniflora

Gene Coding exon 5′ Splice donor 3′ Splice donor Intron
No. Size (bp) No. Size (bp)
SaSTT3A 1 132 TTCTCCgtaaga gcccagGTAATC 1 100
2 63 ACTCAGgtaagc tcatagTTTTTG 2 207
3 56 GACATGgtaagc ttttagGTATCC 3 109
4 74 TTGGTGgcatgt tactagGTTGCT 4 72
5 104 ACAAGAgttgct ctatagGAAGCA 5 85
6 51 GCTATGgtaaat taacagGTCCCC 6 513
7 96 GTAAAGgtaatg atacagACACTG 7 82
8 60 TACATGgtaaac tttcagGTCTGC 8 545
9 114 CCCCTTgtaagt ctgcagGTTATT 9 131
10 87 TTTCTGgtacct ttgcagGTGTTC 10 258
11 104 TGGCTTgtaagt ctgcagAGCTGT 11 177
12 96 TGACCCgtaagc tgacagCACATA 12 305
13 121 ATCATTgtaagt tcacagTCATGC 13 77
14 81 GTAATGgtaagg ttcaagGTACGG 14 87
15 129 CCTGCTgtacgt atgtagCCAGGG 15 96
16 252 TACGTGgtaagt ctgcagGTTCAT 16 97
17 144 GACAAGgtatgc ctgcagGTTGCT 17 72
18 187 TTGGAGgttgat ttacagGGCTTG 18 80
19 98 TACCTTgtgagt tgccagAGGGAT 19 101
20 80 TTACAGgtttgg ctctagGTTGTG 20 92
21 88 GAGGAGgtaata ataaagGTTTTC 21 101
22 90 AAATCAgtaagt ctgcagAATGCC 22 81
23 54     
SaSTT3B 1 861 TTACAGgtagtt ttccagGTTTTC 1 838
2 534 GCGAAGgtattt aaacagGGAGCA 2 445
3 455 TAATAAgtaagt tcccagATTCTT 3 165
4 123 CCTAATgtaagt tggcagGTACAA 4 313
5 60 TCCAGGgtatgt atgcagATATGA 5 306
6 130