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Table 1 Summary of plastid RNA edits in Phalaenopsis orchid

From: Whole plastid transcriptomes reveal abundant RNA editing sites and differential editing status in Phalaenopsis aphrodite subsp. formosana

  Leaf Flower Commona Total Reportedb
Protein coding transcripts 67 69 57 79 43
 1st codon position 9 10 7 12 4
 2nd codon position 47 51 43 55 39
 3rd codon position 11 8 7 12 0
 Creation of start codon 2 2 1 3 1
 Creation of stop codon 4 5 3 6 0
 Nonsynonymous substitution 50 54 46 58 42
 Synonymous substitution 11 8 7 12 1
Non-protein coding transcripts 43 37 22 58 1
 tRNA 1 1 1 1 0
 rRNA 0 0 0 0 0
 Intron 4 6 2 8 0
 Intergenic spacer (IGS) 38 30 19 49 1
Total 110 106 79 137 44
  1. aCommon RNA edits in both leaf and floral with editing status >5%
  2. bPreviously reported in Zeng et al. (2007)