Fig. 8
From: Explore the genetics of weedy traits using rice 3K database
Exploration on weedy rice data. a Distribution of allele frequency of a given allele between 41,044 common SNPs (MAF ≥ 0.05) between weedy rice panel and 3K-RGP. High density is indicated by darker color; black dots are individual comparison. b Phenotype vs. genotype segregation of S6_7624195 in aus and in weedy rice panel. c GWAS results of weedy rice panel. The first two PC based on genome-wide SNPs were included in the GWAS model to control for population structure. The green horizontal line showed the Bonferroni threshold at α = 0.05