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Veronicastrum wulingense (Plantaginaceae), a new species from Southwestern Hubei, China
Botanical Studies volume 64, Article number: 3 (2023)
Abstract
Background
The genus Veronicastrum Heist. ex Fabr. are mainly distributed in East Asia, and only Veronicastrum virginicum (L.) Farw. is disjunctively distributed in eastern North America. The south area of China (extending to Taiwan Island) is the richest in Veronicastrum species. It is of medicinal importance in China as traditional herbs used to treat ascites diseases that caused by schistosomiasis. During field investigation of plant resources in Pingbaying National Forest Park, Southwestern Hubei, China, an unknown flowering population of Veronicastrum was discovered from thick humus layers adjacent to rocks under broad-leaved forests by walkways. They were collected and morphological characters assesed for further taxonomic treatment. Molecular analysis was also conducted to ascertain its phylogenetic position in the genus Veronicastrum.
Results
This species is similar to Veronicastrum liukiuense (Ohwi) T.Yamaz. from the Ryukyu Islands, but can be distinctly differed by its axillary inflorescences (versus terminal on short leafy branches), pedicels up to 2.5 mm (versus sessile), corollas purple to purple-red (versus white tinged with pale purple) and florescence June to July (versus September to October). Also, phylogenetic studies showed the species was an independent clade in the genus Veronicastrum based on the maximum likelihood (ML) analyses using two different matrix sequences of concatenated molecular markers. The plastid genome of this new species is also reported in this study for the first time.
Conclusion
The morphological and molecular evidences support the recognition of Veronicastrum wulingense as a new species.
Background
Veronicastrum Heist. ex Fabr. is a genus composed of perennial herbs in the family Plantaginaceae in Lamiales (The Angiosperm Phylogeny Group 2016; Li et al. 2021). It comprises about 20 species worldwide, which are mainly distributed in the East Asia (Hong et al. 1998), while only Veronicastrum virginicum (L.) Farw. is disjunctively distributed in the eastern North America. Morphologically, Veronicastrum species are closely similar to the genus Veronica L., but can be distinguished from Veronica by equally 5-lobed sepals, inside of corolla being densely hairy, reticulated ellipsoid seeds, hairy filaments which are usually longer than corolla (Yamazaki 1957; Albach and Chase 2001), and different pollen (Hong 1984). The genus is of medicinal importance in China as traditional herbs used to treat ascites diseases that caused by schistosomiasis (Chin and Hong 1979).
Previously, Veronicastrum species were placed in the genus Veronica in the tribe Veroniceae in Scrophulariaceae sensu lato, and later segregated from Veronica as a new genus by von Wettstein (1891) according to the significant morphological difference. However, these two genera, though separate, were still considered to be closely related (Albach and Chase 2001). The taxonomic position of Veronicastrum in Lamiales has changed considerably since its original circumscription with the wide application of molecular systematics. A series of molecular phylogenetic studies have revealed that the traditional delimitation of Scrophulariaceae was a complex polyphyly rather than monophyly, and found that Veroniceae was closely related to Plantago L. in almost all molecular analyses (Olmstead and Reeves 1995; Freeman and Scogin 1999; Olmstead et al. 2001; Albach et al. 2001; Xiao et al. 2020). Therefore, the Veroniceae clade was transferred to Plantaginaceae in the classifications of the Angiosperm Phylogeny Group II (APG II) (The Angiosperm Phylogeny Group 2003) and gradually accepted by the taxonomic domain (Albach et al. 2005; Tank et al. 2006).
In East Asia, the genus Veronicastrum is divided into four sections in Flora Reipulblicae Popularis Sinicae: Sect. Cdlorhabdos (Chin and Hong 1979), Sect. Plagiostachys, Sect. Pterocaulon, and Sect. Verouicastrum (Yamazaki 1957). In recent years, two new species of V. loshanense (Chen and Chou 2008) and V. nogerchii (Ueharai et al. 2013) were found and published from Taiwan Island (China) and Chiba Prefecture (Japan), respectively. Up to date, a total of 18 accepted Veronicastrum species are known worldwide according to The World Checklist of Vascular Plants (WCVP) (https://wcsp.science.kew.org/) (Govaerts et al. 2021).
When conducting field survey of plant resources in Pingbaying National Forest Park, Xianfeng County, Southwestern Hubei, China, in June, 2021, an interesting flowering population of Veronicastrum was found and collected on the thick humus layers adjacent to rocks under broad-leaved forests by walkways. The flowers were densely clustered at rachis apex and steadily ca. 2–3 cm long, and whole plants showed purple-red when young and covered by densely short curly hairs. Our identification was based on morphological characters using the available literature and herbarium specimens. After a detailed comparison with the known species, we ascertained that they represent a new taxon, which we hereby describe as Veronicastrum wulingense.
Methods
Morphological and taxonomic analyses
The morphological description of Veronicastrum wulingense was sourced from the observation and measurement of living plants, photographs taken during fieldwork, and designated type specimens. The whole living plants, inflorescences, and dissected flowers were carefully photographed. Comparison of morphological features was implemented between the new species and other related Veronicastrum species based on Flora of China, Flora of Taiwan, Flora of Japan, and other related literature. The specimen was examined from the virtual specimen from China and world’s major herbarium. Also, 12 Veronicastrum species materials from different places and Pseudolysimachion spicatum (L.) Opiz in China were collected, photographed, and specimens prepared (Additionl file 1: Table S1). The color photo plate and hand drawing illustration of the new species were sort and provided. The morphological comparison of diagnostic characteristics between V. wulingense and the similar species V. liukiuense (Ohwi) T.Yamaz. was carried out. The voucher specimens of the new species were deposited in the herbarium of Wuhan Botanical Garden (HIB), Chinese Academy of Sciences.
Taxon sampling and DNA extraction, sequencing
In this study, 13 samples (10 taxa including Veronicastrum wulingense and Pseudolysimachion spicatum were newly sequenced to construct a phylogenetic tree to reveal the position of the new taxon in Veronicastrum (the voucher information of the 13 samples is listed in Additionl file 1: Table S1). Total genomic DNA was extracted from dry leaf materials that were kept in silica gels for preservation (Chase and Hills 1991) using a modified procedure of CTAB (cetyltrimethylammonium bromide) (Doyle and Doyle 1987; Li et al. 2013). The purified genomic DNA was fragmented to construct short-insert libraries for sequencing based on the Illumina paired-end technology platform (HiSeq-PE150 strategy) in the Novo gene Company (Beijing, China), and 6-GB reads of genome skimming data were obtained.
Plastid genome assembly, annotation
Initially, the 16 plastid genomes were assembled using GetOrganelle v1.7.2 with appropriate parameters (Jin et al. 2020). The Bandage software was used to visualize the final assembly graphs to evaluate the completeness and accuracy of the assembled plastid genomes (Wick et al. 2015). Next, the assembled plastid genomes were annotated and two inverted repeat (IR) regions were found using PGA software with Amborella trichopoda (Accession: AJ506156.2) Baill. and Veronicastrum axillare (Accession: NC_056895.1) as the references (Qu et al. 2019). We then checked the annotated genes and protein-coding regions and corrected detected errors manually using Geneious-v10.2.3 (Kearse et al. 2012). The information of plastid genome features of V. wulingense was also analyzed in the software Geneious. The circular plastid genome map of V. wulingense was drawn and visualized in OGDRAW online software (https://chlorobox.mpimp-golm.mpg.de/OGDraw.html) (Accessed on 24 December 2021) (Greiner et al. 2019).
Sequence alignment and phylogenetic analysis
The phylogenetic position of Veronicastrum wulingense in the genus Veronicastrum was analyzed based on the maximum likelihood (ML) method that was performed by the IQ-TREE program with 1000 bootstrap replications in the software PhyloSuite-v1.2.2 (Nguyen et al. 2015; Zhang et al. 2020; Minh et al. 2013). Two different phylogenetic trees were constructed to maximize the use of currently available and limited DNA data of Veronicastrum species from our collection and NCBI online database.
The aligned and concatenated molecular marker sequences of matK, rbcL, and trnH-psbA were selected to reconstruct phylogenetic tree in the tribe Veroniceae from 13 newly sequenced samples (Additional file 1: Table S1), 9 released plastid genomes (Additional file 1: Table S2) and four concatenated molecular marker sequences of plastid fragments (Additional file 1: Table S3) from the NCBI database using the program Concatenate Sequence in PhyloSuite-v1.2.2, of which outgroups were Aragoa abietina Kunth and A. cleefii Fern Alonso. The aligned marker sequences of trnL-F and ITS (internal transcribed spacer) were also concatenated to the other matrix dataset (Outgroup: A. abietina), including 13 newly sequenced samples and 17 concatenated molecular marker sequences from NCBI database (Additional file 1: Table S4). The software Partitionfinder 2 was used to find the best-fit partition model of the two different matrix sequences according to the Akaike information criterion (AIC) for ML analysis (Lanfear et al. 2017).
Results and discussion
Taxonomic treatment
Veronicastrum wulingense G.W. Hu & Q.F. Wang sp. nov. (Figs. 1, 2)
Type
CHINA. Hubei, Enshi Tujia and Miao Autonomous Prefecture, Xianfeng county, Pingbaying township, Pingbaying National Forest Park, Sidong Gorge, elev. 1324 m, 23 Jun, 2021, S.X. Ding, H. Jiang, F.M. Mutie, G.W. Hu PBY-346 (holotype: HIB!, isotypes: PE, KUN, IBSC).
Diagnosis
Veronicastrum wulingense belongs to the typical Veronicastrum species of axillary inflorescences (Sect. Plagiostachys species). Morphologically, it is closely similar to V. liukiuense from the Ryukyu Islands, but can be distinctly differed by its axillary inflorescences (versus terminal on short leafy branches), pedicels up to 2.5 mm (versus sessile), corollas purple to purple-red (versus white tinged with pale purple), and florescence June to July (versus September to October) (Table 1). Also, these diagnostic characteristics of peduncles up to 7 cm, flowers clustered densely in rachis apex and steadily ca. 2–3 cm long, which are unique in the all known Veronicastrum species of axillary inflorescences.
Description
Herbs, perennial. Rhizomes short, horizontal. Stems densely short curly hairs, up to 90 cm long, terete, without angles and strias, basally branched, arching and rooting apically. Leaves alternate, petioles short, often purple-brown, no more than 5 mm long, with short curly hairs. Leaf blade thick papery to leathery, ovate to ovate-lanceolate, 3–12 × 2–6 cm; base rounded, rarely broadly cuneate, apex acute to shortly acuminate; margin serrations undate, irregular, cuspidate to long apiculate dentate, apex upward, or crenate. Leaf blades abaxially purple-red, sparse white pubescent to nearly glabrous on both surfaces, densely on veins; veins clear, lateral veins 4 − 6 pairs, concave on adaxial surface and convex on abaxial surface. Spicate inflorescences axillary, 4–9 cm long; peduncles 1–7 cm long, usually surrounded by several small leafy involucrate bracts in middle-upper part; flowers pedicellate to subsessile (0–2.5 mm long), densely clustered at rachis apex, steadily ca. 2–3 cm long; peduncles, rachis, and pedicels densely short curly hairs. Calyxes deeply 5-lobed, one adaxial lobe smaller, bracts and calyx lobes linear-lanceolate to narrowly triangular, conspicuously shorter than corolla, densely short ciliate. Corollas purple to purple-red, 5.5–7 mm long; corolla tubes tubular, straight, inner surface crinite; corollas equally 4-lobed, lobes all straight, actinomorphic, ovate-triangular to lanceolate, 2/5–1/2 of corolla length. Stamens 2, slightly to conspicuously exserted, exceeding corolla by ca. 2–3 mm long, crinite at lower middle part; anthers orange-yellow, oblong, 1–1.5 mm long; anther locules connivent, not confluent; ovaries glabrous, stigmas small and slightly dilated, styles 5–7 mm long. Capsules ovoid-globose, 3–3.5 mm long, 2-grooved, 4-valved; style, bracts, and calyx persistent. Seeds numerous per capsule, small, oblong, seed coat reticulate. Fl. Jun–Jul, Fr. Aug–Oct.
Distribution and habitat
The new species Veronicastrum wulingense is currently known only from Sidong Gorge of Pingbaying National Forest Park in the Northcentral of Wulingshan Region, Southwestern Hubei, China—its type locality. All our collections were made from the thick humus layers adjacent to rocks under broad-leaved forests by walkways, at elevations of 1000–1400 m above sea level.
Etymology
The specific epithet ‘wulingense’ refers to Wulingshan Region, where the new species is distributed. The Chinese name is ‘Wu Ling Fu Shui Cao (武陵腹水草)’.
Phenology
Based on our field surveys, the new species was observed flowering from June to July, and fruiting from August to October.
Conservation Significance
Veronicastrum wulingense is an endemic species and currently only known from the type locality in China. It has narrow distribution area is very narrow and only known few from populations. Therefore, we recommended that this species be treated as a protected plant in China, as well as the protection of its habitat.
The phylogenetic position of Veronicastrum wulingense
The phylogenetic position of Veronicastrum wulingense was revealed in the genus Veronicastrum with high support values in the ML trees based on two different matrix sequences of concatenated molecular markers (Figs. 3, 4). The results displayed that V. wulingense is an independent clade and related to V. rhombifolium (Hand.-Mazz.) Tsoong and V. yunnanense (W. W. Smith) Yamazaki in the two phylogenetic trees, while distant from the morphologically similar species V. liukiuense (Fig. 3). The molecular evidence support the recognition of V. wulingense as a new species. Besides, the species of V. longispicatum (Merr.) Yamazaki, V. latifolium (Hemsl.) Yamazaki, and V. stenostachyum (Hemsl.) Yamazaki (V. stenostachyum subsp. plukenetii), which are morphologically similar, showed unclearly and crossed interspecific relationships. We also found that the clade of Pseudolysimachion spicatum is nested in the clades of genus Veronica and verified Veronica is a paraphyly genus (Chen et al. 2020).
The plastid genome features of Veronicastrum wulingense
The complete plastid genome of Veronicastrum wulingense is 152,370 bp in length and portrays a circular and quadripartite structure, typical of most angiosperms (Fig. 5). The genome encompass a large single-copy (LSC) region (87,034 bp) and a small single-copy (SSC) region (18,492 bp), which are separated by a pair of inverted repeats (IRs) regions (25,980 bp). The GC content is 38.3% in the whole plastid genome, while that in the LSC, SSC, and IR regions are 36.5%, 32.3%, and 43.3%, respectively, which is relatively higher than the reported Veronica persica Poir. and V. nakaiana Ohwi. (a closely related genus of Veronicastrum) in LSC and SSC regions (Choi et al. 2016). The GC content in IR regions is significantly higher than that in LSC and SSC, which may be due to the tRNA and rRNA genes that occupy a higher proportion of the regions and have a relatively higher GC content. A total of 132 functional genes were annotated in the plastid genome of V. wulingense and can be divided into four categories and subdivided into 18 groups (Table 2), which include 87 protein-coding genes (PCGs), 37 tRNA genes, and 8 rRNA genes (duplicated in two IR regions: 7 PCGs, 7 tRNA genes, and 4 rRNA genes). Also, 18 genes with introns were annotated, including 12 PCGs (clpP and ycf3 genes contain two introns) and six tRNA genes. Additionally, the start codon of rps19 gene transcription mutated and is non-canonical “GTG” instead of the most common “ATG”.
Circular plastid genome map of Veronicastrum wulingense. Genes drawn within the circle are transcribed clockwise, while those drawn outside are transcribed counterclockwise. Genes of different functional groups are colored by different colors. The darker gray in the inner circle corresponds to the DNA GC content, while the lighter gray corresponds to the DNA AT content
Availability of data and materials
Not applicable.
Abbreviations
- HIB:
-
Wuhan Botanical Garden, Chinese Academy of Sciences, Herbarium
- PE:
-
Institute of Botany, the Chinese Academy of Sciences, Herbarium
- KUN:
-
Kunming Institute of Botany, Chinese Academy of Sciences, Herbarium
- IBSC:
-
South China Botanical Garden, Chinese Academy of Sciences, Herbarium
- ML:
-
Maximum likelihood
- LSC:
-
Large single-copy
- SSC:
-
Small single-copy
- IR:
-
Inverted repeat
- PCG:
-
Protein-coding gene
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Acknowledgements
The authors are grateful to Benzhong Wang from Hunan Gaowangjie National Nature Reserve Administration, Jiahao Shen from Institute of Botany, Jiangsu Province and Chinese Academy of Sciences and Shuai Peng in our group for helping sampling. We give thanks to Peninah Cheptoo Rono for reviewing the manuscript. We also sincerely thank the staff of Pingbaying National Forest Park, Xianfeng County, Enshi Tujia and Miao Autonomous Prefecture, Hubei Province, for their support during the investigation.
Funding
This work was supported by the National Natural Science Foundation of China (31970211).
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SXD, GWH, HJ, and ENW first discovered and collected the new species in the field survey. SXD, HJ, and JR conducted the molecular experiment. SXD and JT analyzed the data. SXD drafted the manuscript. GWH and QFW designed and supervised the study. GWH provided the funding. FMM and SXD reviewed the manuscript. All authors have read and agreed with the submission of this manuscript. All authors read and approved the final manuscript.
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Supplementary information
Additional file 1: Table S1.
The vouchers of 13 samples of genome skimming. Table S2. 9 plastid genomesfrom NCBI database. Table S3. 4concatenated sequences based on three DNA plastome fragments from NCBI database. Table S4. 17 concatenatedsequences based on two DNA fragments from NCBI database.
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Ding, SX., Jiang, H., Tian, J. et al. Veronicastrum wulingense (Plantaginaceae), a new species from Southwestern Hubei, China. Bot Stud 64, 3 (2023). https://doi.org/10.1186/s40529-023-00367-y
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DOI: https://doi.org/10.1186/s40529-023-00367-y
Keywords
- Veronicastrum wulingense
- New species
- Southwestern Hubei
- Phylogeny
- Wulingshan region