- Original Article
- Open Access
Effective Agrobacterium-mediated transformation protocols for callus and roots of halophyte ice plant (Mesembryanthemum crystallinum)
Botanical Studies volume 60, Article number: 1 (2019)
Ice plant (Mesembryanthemum crystallinum L.) is a model plant for studying salt-tolerant mechanisms in higher plants. Many salt stress-responsive ice plant genes have been identified with molecular and biochemical approaches. However, no further functional characterization of these genes in host plant due to lack of easy and effective transformation protocols.
To establish efficient transformation system of ice plants, three types of ice plant materials, hypocotyl-derived callus, aseptically-grown seedlings and pot-grown juvenile plants, were used to develop Agrobacterium-mediated transformation protocols. The highest transient transformation efficiency was with 5-day-old ice plant callus co-incubated with an Agrobacterium tumefaciens at 2.5 × 109 cells mL−1 for 48 h. The 3-day-old ice plant seedlings with root tip removed were successfully infected with A. tumefaciens or A. rhizogenes, and obtained 85% and 33–100% transient transformation rates, respectively. The transient transformation assays in ice plant callus and seedlings demonstrated that the concentrations of Agrobacteria, the durations of co-incubation time, and the plant growth stages were three important factors affecting the transient transformation efficiencies. Additionally, pot-grown juvenile plants were syringe-injected with two A. rhizogenes strains A8196 and NCPPB 1855, to establish transformed roots. After infections, ice plants were grown hydroponically and showed GUS expressions in transformed roots for 8 consecutive weeks.
Our Agrobacterium-mediated transformation protocols utilized hypocotyl-derived callus and seedlings as plant materials, which can be easily obtained in large quantity. The average successful transient transformation rates were about 2.4–3.0% with callus and 33.3–100.0% with seedlings. We also developed a rapid and efficient protocol to generate transgenic roots by A. rhizogenes infections without laborious and challenging tissue culture techniques. This protocol to establish composite ice plant system demonstrates excellent improvements in efficiency, efficacy, and ease of use over previous ice plant transformation protocols. These Agrobacterium-mediated transformation protocols can be versatile and efficient tools for exploring gene functions at cellular and organ levels of ice plants.
The Mesembryanthemum crystallinum L. (family: Aizoaceae, order: Caryophyllales), also known as the common ice plant or the crystalline ice plant, is an important model plant to study the plant response to various environmental abiotic stresses. The average life cycle of M. crystallinum is 4–5 months and can be characterized as five distinct growth phases: seedling, juvenile, adult, flowering, and seed-forming stages (Adams et al. 1998). The growth period can be significantly affected by several environmental factors, including water supply, temperature, light quantity and quality, and nutrient supply (Bohnert and Cushman 2000). The genome size of M. crystallinum is about 390 Mb distributed in nine chromosomes (DeRocher et al. 1990; Meyer et al. 1990). Because of the relatively small size genome, self-fertilization, and large seed production, M. crystallinum is a potential genetic model.
Mesembryanthemum crystallinum is a facultative halophyte with distinctive ability to change from C3 photosynthesis to Crassulacean acid metabolism (CAM) under stress, tolerate high salinity by transporting sodium into vacuoles of specialized epidermal bladder cells (EBCs) and accumulate osmolytes in the cytosol during water deficit and salt stress (Bohnert and Cushman 2000; Cushman and Borland 2002). CAM induction in M. crystallinum provides a prototype for plant scientists to study various gene and enzyme functions associated with the CAM pathway, such as CAM-specific isoform of phosphoenolpyruvate carboxylase (PEPC) (Cushman et al. 1989; Winter and Holtum 2014).
EBCs are non-glandular (non-secreting) trichomes located on the surface of leaves, stems, and flower buds (Adams et al. 1998). EBCs are underdeveloped and flattened to surfaces of the young plant aerial parts but are enlarged and filled with liquid in adult plants when plants are switching to the CAM photosynthetic pathway and exposed to salt stress. EBCs primarily function in water, sodium, and chloride ion storage when plants have limited water supply or are under salt stress (Rygol et al. 1989; Adams et al. 1998; Jou et al. 2007; Barkla et al. 2016). Recent quantitative proteomic studies demonstrated that several transport proteins and proteins involved in photosynthesis, primary metabolism, and CAM are significantly increased in EBCs, which further supports the important roles of EBCs for salt tolerance in M. crystallinum (Barkla et al. 2016). Several transcriptomic, proteomic, and mutant (CAM-less and EBC-less) studies have identified several M. crystallinum proteins that play important roles in the CAM pathway and salinity stress responses (Kore-eda et al. 2004; Jou et al. 2007; Barkla et al. 2009, 2012, 2016; Haider et al. 2012; Cosentino et al. 2013; Oh et al. 2015; Tsukagoshi et al. 2015; Chiang et al. 2016).
Besides the well-characterized genes expressed in EBCs and CAM, the functions of many salt stress-responsive genes remain to be characterized due to the lack of available mutants or efficient transformation systems (Bohnert and Cushman 2000). A. tumefaciens is a plant pathogen that can transfer its own genetic material into plant cells. The Agrobacterium-mediated transfer of genes into plant cells is the most frequently used genetic transformation method and has a number of advantages. It is easy to use and relatively inexpensive and generally results in a low copy number of relatively large fragments of T-DNA insertions as compared with other plant transformation methods, such as particle bombardment (Anami et al. 2013; Hwang et al. 2017). Agrobacterium tumefaciens-mediated transformation systems have been attempted by using young leaf, root, cotyledon, hypocotyl, and callus of ice plant, but successful transformation callus was only obtained with root and hypocotyl explants (Ishimaru 1999). Similarly, Agrobacterium rhizogenes was used to transform ice plant seedlings and obtained transgenic roots with 6–20% transformation rates (Andolfatto et al. 1994; Konieczny et al. 2011). In addition, very limited established protocols and relatively low efficiencies for whole-plant regeneration from ice plant callus by somatic embryogenesis and organogenesis were reported (Meiners et al. 1991; Cushman et al. 2000; Libik et al. 2005). With the help of plant hormones, the regeneration efficiency increased by using cotyledonary node explants; however, the transformation efficiency with A. tumefaciens was only 0.3% (Sunagawa et al. 2007). The hairy-root and transgenic callus cultures from ice plants have been obtained by A. rhizogenes and A. tumefaciens-mediated transformation for more than 20 years, no any functional study of CAM induction or salt tolerance has been applied, may be due to the low transformation efficiencies. Therefore, there is still a room for improvement of transformation methods for ice plants to facilitate functional genomic studies (Andolfatto et al. 1994; Ishimaru 1999; Sunagawa et al. 2007; Konieczny et al. 2011).
Because of relatively few successful reports regarding ice plant transformation protocols, here we used in vitro-cultured callus and intact plants to establish transformation procedures of ice plants. We established transformation systems of three types of ice plant materials with infection by two kinds of Agrobacterium strains, A. tumefaciens and A. rhizogenes, with high transformation rates which will provide the plant research community with more effective tools to study gene functions in ice plants.
Bacteria strains, plasmids, and culture conditions
Agrobacterium tumefaciens and A. rhizogenes strains were grown in 523 media (Kado and Heskett 1970) or on 523 agar supplemented with appropriate antibiotics (rifampicin 50 μg mL−1, spectinomycin 100 μg mL−1, and kanamycin 20 μg mL−1) at 28 °C. Escherichia coli strains were grown at 37 °C in Luria Broth (LB) or 2× YT media (1.6% tryptone, 1% yeast extract, 0.5% NaCl, pH 7.0) containing appropriate antibiotics (spectinomycin 100 μg mL−1 and kanamycin 20 μg mL−1). A complete list of bacteria strains and plasmids used in this study is in Additional file 1: Table S1.
Seeds of ice plant (M. crystallinum) (collection of the Known-You Seed Co., Kaohsiung, Taiwan) were surface-sterilized and placed on Murashige and Skoog basal medium (MS medium) (Murashige and Skoog 1962) containing 3% (w/v) sucrose and 1% (w/v) agar. The 3-, 5-, and 7-day-old seedlings grown in constant 50 μmol m−2 s−1 light at 25 °C were used for transient transformation assays. Additionally, hypocotyl explants of 7-day-old ice plant seedlings were used as initial materials for callus inductions. Callus tissue was initiated in callus-inducing medium (CIM) (20.6 mM NH4NO3, 18.8 mM KNO3, 3 mM CaCl2, 1.5 mM MgSO4, 2.5 mM KH2PO4, 100 μM H3BO3, 100 μM MnSO4, 5 μM KI, 30 μM ZnSO4, 1 μM NaMoO4, 0.1 μM CuSO4, 0.1 μM CoCl2, 100 μM Fe-EDTA, 560 μM myo-inositol, 8 μM nicotinic acid, 5 μM pyridoxol-HCl, 30 μM thiamine chloride, 0.5 μM kinetin, 23 μM 2,4-dichlorophenoxyacetic acid, 1.5% sucrose, 1% agar, pH 5.6–5.8) under constant 50 μmol m−2 s−1 light at 25 °C according to Jou et al. (2006). The callus cultures were maintained in same conditions and subcultured every 10–14 days.
Seeds were germinated directly in mixed soil (peat moss: vermiculite: sand 3:1:2) under a 14-h light/10-h dark at 300 μmol m−2 s−1 and 25 °C. 5 to 6 weeks after germination, juvenile plants were infected with A. rhizogenes. One week after infection, plants were grown hydroponically in a modified Johnson’s nutrient solution as described (Chu et al. 1990).
Transformation assays of hypocotyl-derived callus with A. tumefaciens
Assays of transformation of ice plant callus with infection by A. tumefaciens strains were as described (Ishimaru 1999) with minor modifications. Bacteria strains were first grown in 523 media with appropriate antibiotics at 28 °C to OD600 0.8–1.0. The bacteria cells were then washed and resuspended in AB-MES media (2% glucose, 0.3% K2HPO4, 0.03% MgSO4·7H2O, 0.1% NaH2PO4, 0.1% NH4Cl, 0.015% KCl, 0.001% CaCl2, 0.00025% FeSO4·7H2O, and 0.97% MES, pH 5.5) (Hwang et al. 2010) without antibiotics at 28 °C to mid-log phase for 6 h. After adding 200 μM acetosyringone (AS; Sigma-Aldrich, St. Louis, MO, USA), bacteria cultures were further cultivated at 28 °C for 16–18 h and collected, resuspended in liquid CIM at the desired bacteria concentrations for infection.
The hypocotyl-derived callus was transferred from solid to liquid medium for subsequent Agrobacterium infection and GUS staining. During repeatedly shaking and washing of callus, a large quantity of “single cells” was released into the liquid medium and named as “callus-derived cells”. The callus cultures were maintained in 25 mL of liquid CIM medium in 125 mL Erlenmeyer flasks and subcultured every 14 days.
The A. tumefaciens EHA105 strain containing the T-DNA binary pBISN1 plasmid (Additional file 1: Table S1) was used to co-incubate with the 5-, 7-, 10-, or 14-day-old callus for 2 days. Two days after co-incubation with bacteria strains, ice plant callus was washed and sonicated for 10 min in liquid CIM medium containing timentin (100 μg mL−1) five times to remove bacteria, then transferred into the CIM medium containing timentin (100 μg mL−1) and kanamycin (100 μg mL−1). More than 2 × 105 ice plant callus-derived cells were infected with A. tumefaciens strain for each independent transformation assay. After 1- or 2-day recovery, ice plant callus was stained with X-gluc staining solution [50 mM sodium phosphate buffer, 0.1% Tween 20, 3% sucrose, and 1–2 mM 5-bromo-4-chloro-3-indolyl-β-d-glucuronic acid (X-Gluc), pH 7.0] for 1 day at 37 °C. An Olympus IX71 fluorescence microscope (Olympus Optical Co. Ltd., Tokyo, Japan) with the DP Controller program was used to observe GUS expression in ice plant callus-derived cells and determine transient transformation efficiencies. We treated GUS-stained samples with 0.5% pectinase (macerase) for 1 day to disrupt the aggregates before counting cell number by hemacytometer. More than 5 × 103 callus-derived cells were examined and counted for each transformation experiment to determine transient transformation rates. Transformation rates were mean ± SD (standard deviation) from at least 3 independent experiments. The transformed callus was then continuously cultured in CIM medium containing 100 μg mL−1 kanamycin.
Transformation assays of aseptically-grown seedlings with A. tumefaciens and A. rhizogenes
Assays of transformation of ice plant seedlings with infection by A. tumefaciens and A. rhizogenes strains were as described (Andolfatto et al. 1994; Ishimaru 1999; Sunagawa et al. 2007; Konieczny et al. 2011) with minor modifications. Bacteria cultures were prepared as mentioned in the above paragraph and resuspended in MS medium at the desired concentrations for infection. The 3-, 5-, or 7-day-old intact ice plant seedlings or seedlings with root tip removed were co-incubated with 2.5 × 109 cfu (colony forming unit) mL−1 of the A. tumefaciens EHA105 strain containing the pBISN1 plasmid (Additional file 1: Table S1) or the A. rhizogenes A4 and A8196 strains containing a binary vector pCAMBIA1303 (Additional file 1: Table S1) for 2 days. After 2-day co-incubation period, ice plant seedlings were washed with liquid MS medium containing timentin to remove bacteria and transferred to MS medium with timentin for 1, 2, 5, or 7 days. Ice plant seedlings were then stained for GUS activities as described above and were observed with a stereoscopic microscope to determine transient transformation efficiencies. About 60–80 ice plant seedlings were infected with A. rhizogenes strain for each independent transformation assay. Data are mean ± SD (standard deviation) from at least 3 independent experiments.
Transformation assays of pot-grown juvenile plants with A. rhizogenes
The 5- to 6-week-old pot-grown ice plants were infected with A. rhizogenes strains (Additional file 1: Table S1) according to Hwang et al. (2010) and (2013). Bacteria strains were grown in 523 media with appropriate antibiotics at 28 °C to OD600 0.8–1.0. Bacteria cells were then washed and resuspended in 154 mM NaCl at the 109 cfu mL−1 bacteria concentrations for infection. A syringe was used to inject 100 μL bacteria cultures into 5- to 6-week-old plant stems. One week after infection, pot-grown ice plants were transferred to hydroponic culture as described (Chu et al. 1990). Because the optimal growth of halophytic ice plants is achieved with 100–200 mM NaCl in the hydroponic solution, NaCl was added stepwise to reach a final concentration of 200 mM in a 4-week period. Roots of hydroponically grown plants were stained with X-gluc staining solution to examine positive GUS staining.
About 16–20 ice plants were infected with each A. rhizogenes strain for each independent transformation assay. The transformation efficiencies were average values from at least three independent experiments. Error bars were calculated using Excel STDEVP function. The significance test between treatments was based on pairwise Student t-test, P < 0.05.
DNA isolation, genomic DNA PCR, and Southern blot analysis
The DNA isolation protocol from ice plant tissues was based on Weigel and Glazebrook (2002) with minor modifications. Liquid nitrogen frozen plant tissues were ground and mixed with extraction buffer (250 mM NaCl, 25 mM EDTA, 0.5% SDS, 200 mM Tris–HCl, pH 7.5). The isolated plant extract was mixed with an equal amount of phenol: chloroform: isoamyl alcohol (25:24:1) solutions to remove proteins, then the supernatant was precipitated with cold isopropanol to isolate genomic DNA. The 100-ng genomic DNA was used for PCR reactions with GeneTaq DNA polymerase (GenePure, Taiwan) and pairs of primers (Additional file 2: Table S2) for the presence of β-glucuronidase (GUS), yellow fluorescent protein (YFP), kanamycin resistance gene (Kan), or phosphoenolpyruvate carboxylase (PPC1) in transformed and untransformed plant tissues.
For Southern blot analysis, genomic DNA of root tissues was treated with 10 μg L−1 RNase for 4 h at 25 °C followed by phenol–chloroform extraction and ethanol precipitation. Thirty μg DNA of each root sample was cut with SphI-HF (New England Biolabs, Ipswich, MA, USA) for 16 h at 25 °C. The digested products were separated by 1% agarose gel, denatured in 1.5 M NaCl, 0.5 M NaOH for 30 min, and transferred to hybridization membrane (GeneScreen, DuPont, Boston, MA, USA). Hybridization was performed at 65 °C with 32P-labeled probe (Amersham Rediprim II, GE Healthcare, Pittsburgh, PA, USA). The probe is a PCR amplified and gel purified product of pCAMBIA1303 using GUS1 and GUS2 primer (Additional file 2: Table S2). After 20 h of hybridization, the membrane was washed twice in 2× SSC at room temperature for 15 min each, twice in 2× SSC, 1% SDS at 65 °C for 30 min each, and finally once in 0.1× SSC at room temperature for 30 min. The membrane was exposed to an imaging plate (BAS-MS, Fuji Film, Tokyo, Japan) at room temperature and signal was detected by a phosphorimager (Typhoon FLA 7000, GE Healthcare, Pittsburgh, PA, USA).
Protein extraction and Western blot analyses
Ice plant tissues were ground with liquid nitrogen and mixed with CelLytic P (Sigma Chemical Co., St. Louis, MO, USA) supplemented with the 2 mM leupeptin and a protease inhibitor cocktail (1:100 dilution) for plant cell extracts from Sigma (product number: P 9599). Crude plant protein extracts were isolated as the manufacturer instructed. The protein concentrations were determined by using a BCA protein assay kit (Pierce, Rockford, IL) and spectroscopy (SPECTRA MAX PLUS 384 Molecular Devices, Sunnyvale, CA, USA). Equal amounts of plant proteins were loaded on 12.5% SDS-polyacrylamide gels and western blot analysis was performed (Ausubel et al. 2003) with a 1:1000 dilution of anti-GUS antibody (Sigma Chemical Co., St. Louis, MO, USA). Membranes were developed by using a chemiluminescent detection method (Super Signal West Pico Kit from Pierce, Rockford, IL, USA). Proteins were also stained with the Coomassie brilliant blue R-250 to demonstrate equally loaded protein amounts in each lane.
Optimization of protocol for A. tumefaciens-mediated transient transformation in ice plant callus
Ishimaru (1999) found 54% A. tumefaciens-mediated transformation frequencies in root and hypocotyl of ice plant but did not observe any transformed callus. To establish a workable transformation system for ice plant callus, we tested conditions that affect transformation efficiency, including bacteria concentration, recovery time, and age of callus. A. tumefaciens EHA105 strain containing a GUS reporter gene in the T-DNA binary pBISN1 plasmid was used to infect ice plant callus. Three bacteria concentrations, 1.25 × 109, 2.5 × 109, and 5 × 109 cfu mL−1, were chosen to infect 14-day-old ice plant callus for 2 days, then the callus was placed in CIM medium for 24 or 48 h to recover and determine transient transformation rates. Callus infected with 2.5 × 109 cfu mL−1 bacteria with 24-h recovery had the transient transformation rate of 2.4% (Fig. 1a). When the higher bacteria concentration, 5 × 109 cfu mL−1, was used to infect ice plant callus, the transient transformation efficiency was only 1.4% with 24-h recovery (Fig. 1a). When callus recovered for 48 h under 1.25 × 109 cfu mL−1 bacteria concentration, transient transformation efficiency of 1.8% was obtained (Fig. 1a). With higher bacteria concentrations, 2.5 and 5 × 109 cfu mL−1, the transient transformation efficiencies were decreased to 0.9–1.3% with 48-h recovery (Fig. 1a). These data suggest that longer recovery time (48-h) for ice plant callus may be beneficial with lower bacteria concentration (1.25 × 109 cfu mL−1) used to infect callus. In summary, ice plant callus showed the highest transient transformation efficiency with bacteria infection concentration 2.5 × 109 cfu mL−1 for 24-h recovery.
Because different ages of callus may show different competency for A. tumefaciens infection, we used 5-, 7-, 10- or 14-day-old callus to be co-incubated with 2.5 or 5 × 109 cfu mL−1 bacteria solutions and examined their transformation rates. The highest transformation rate was with 5-day-old callus co-cultured with 2.5 × 109 cfu mL−1 and the transformation rates decreased with increasing age of callus (Fig. 1b). These results suggest that younger ice plant callus may be more susceptible to A. tumefaciens infection. To increase the percentage of transformed callus, callus was transferred into liquid CIM containing timentin and kanamycin, and continued to grow for 4 passages. The percentage of transformed callus increased from 3 to 70% under continuous antibiotic selective pressure. GUS staining of transformed and untransformed cultured callus-derived cells (Fig. 1c) and genomic DNA PCR (Fig. 1d) both confirmed that GUS was expressed in the transformed callus-derived cells but not present in untransformed callus-derived cells.
To further examine the established transformation protocol, we used another binary vector, pBA002, containing the YFP reporter gene and the bar selectable marker in the A. tumefaciens strain. Transformed callus continued to grow in medium supplemented with 25 mg L−1 glufosinate ammonium and expressed YFP protein up to 4 months (Additional file 3: Figure S1). Low intrinsic fluorescence was occasionally detected in the cell wall of untransformed callus-derived cells, which interfered with YFP signals. Therefore, we chose detection by GUS staining in subsequent experiments.
Transient transformation efficiencies of ice plant seedlings with A. tumefaciens or A. rhizogenes infection
After showing callus can be transformed by A. tumefaciens, we used this protocol to test the ability of A. tumefaciens infection in intact tissues of ice plant. After 2-day infection and 1-day recovery, 3-, 5-, and 7-day-old seedlings were stained for GUS activities to determine transient transformation efficiency. Representative GUS staining results are in Fig. 2. Among all tested plants, transient transformation efficiency was highest, 85.0%, for 3-day-old plant seedlings with wounding (root tip removed) (Table 1). Similarly, transient transformation rate was higher for intact 3- than 5-day-old seedlings (Table 1). The 7-day-old seedlings had the lowest transient transformation rates, 0.0% and 13.3%, as compared with 3- and 5-day-old seedlings (Table 1). The results suggested that younger tissues with wounding might be more easily infected by A. tumefaciens. Transformation results from 3- and 5-day-old seedlings all showed a higher percentage of cotyledons than hypocotyls with GUS activities. Hence, cotyledons might be more susceptible to bacteria infections than hypocotyls, or a higher proportion of cotyledon cells could recover from bacterial infections and express the transferred gene than hypocotyl cells. Furthermore, no GUS staining was detected in roots of seedlings at all stages (Fig. 2). In 7-day-old seedlings, only with root tips removed did A. tumefaciens transiently transform 13.3% of seedling samples (Table 1), which supports the presence of wound sites in plants during A. tumefaciens infections is important.
Under our infection procedures, A. tumefaciens was able to transform shoot but not root tissues of seedlings. To establish a transformation system in ice plant roots, we infected 3-, 5-, and 7-day-old seedlings with two types of A. rhizogenes, A4 and A8196, with a GUS reporter gene in the binary vector pCAMBIA1303. The transient transformation efficiency of seedlings was determined at 1, 2, 5, or 7 days after 2-day infection. The highest transient transformation efficiency, 100%, was with 3- and 5-day-old seedlings infected with both A. rhizogenes strains at 1 day after bacteria infection (Table 2). Among all tested infection conditions, 7-day-old seedlings showed 0.0% transient transformation rate (Additional file 4: Table S3). The 7-day-old seedlings might be less susceptible to Agrobacterium infection, which is consistent with transient transformation results obtained with A. tumefaciens (Table 1). Transient transformation rates with A. rhizogenes A4 and A8196 infection in 3-day-old seedlings remained at 92% to 100% even 5 days after infection (Table 2). Transformation rates were higher with both cotyledons and roots of 3-day-old seedlings than hypocotyls, which suggest that A. rhizogenes A4 and A8196 may transiently transform not only roots but also cotyledons. At 7 days after infection in 3-day-old seedlings, the transient transformation rates with A. rhizogenes A4 and A8196 infection both decreased significantly (Table 2). Similar results were obtained with 5-day-old seedlings in that transient transformation rates with A. rhizogenes A4 and A8196 were both reduced significantly at 5 days after infection (Table 2). Because the GUS reporter gene in the binary vector pCAMBIA1303 lacks the intron fragment, it is possible that GUS staining may result from the leaky expressions of bacterium. The representative GUS staining results showed that GUS expressions were detected in whole roots and cotyledon tissues of seedlings rather than patchy occurrence of staining caused by bacterium (Fig. 3a, b). Genomic DNA PCR results confirmed that GUS gene fragments were only detected in successfully transformed roots and cotyledons tissues of seedlings (Fig. 3c, d). In order to determine if the PCR amplifications of the GUS gene fragment might come from bacteria DNA contaminations in the genomic DNA isolations, the kanamycin resistance gene (Kan) located outside the T-DNA region of the pCAMBIA1303 vector was also examined by genomic DNA PCR. The genomic DNA PCR results showed that no Kan gene fragment from the pCAMBIA1303 vector was detected in isolated genomic DNA samples (Fig. 3c, d). In summary, these results in Tables 1 and 2 reveal that when infecting younger plant tissues, that is, 3-day-old seedlings, with A. tumefaciens or A. rhizogenes strains, GUS expression periods were longer, which suggests that younger plant tissues may be easier to be infected with Agrobacterium and/or younger plant tissues may more easily recover from bacteria infection and express transgenes.
Establishing transgenic ice plant roots expressing GUS via A. rhizogenes infection
We have shown that using ice plant seedlings is a feasible system to test transient transformation efficiency, but seedlings were difficult to resume growth after infection. Table 2 showed ice plant roots were readily infected by A. rhizogenes and were able to maintain T-DNA expression up to 7 days. In an attempt to generate transgenic roots, we syringe-infected 5- to 6-week-old pot-grown plants with A. rhizogenes. Two A. rhizogenes strains A8196 and NCPPB 1855, harboring the binary vector pCAMBIA1303 were used to infect plants. Infected plants were removed from soil 1 week after infection and were grown hydroponically in modified Johnson’s nutrient solution.
At 1 week after infection, plants infected with A. rhizogenes A8196 showed higher percentage of GUS activities (35.9%) in roots than plants infected with NCPPB 1855 (Fig. 4a). These data indicated that A. rhizogenes A8196 had higher transient transformation efficiency. Representative mock control ice plants and plants infected with A. rhizogenes A8196 and NCPPB 1855 showing GUS activity in roots at 1 week after infection, are shown in the Fig. 4b—1, 2, 3, respectively. At 2 weeks after infection, the transformation efficiency on infection with the two A. rhizogenes strains continued to increase to 75–81% (Fig. 4a). The transformation efficiencies on infection with the two A. rhizogenes strains all gradually decreased at 3 weeks after infection (Fig. 4a). At 4 weeks after infection, the transformation rates of A. rhizogenes strains A8196 and NCPPB 1855 was 29.4% ± 3.2% and 22.2% ± 2.6%, respectively (Fig. 4a). Results shown in the Fig. 4a demonstrated that transformation rates at 4 weeks after infection with two A. rhizogenes strains were 2.8- to 3.4-fold lower than transformation rates at 2 weeks after infection. Transformation efficiency remained relatively higher on infection with A. rhizogenes A8196 than the NCPPB 1855 strain (Fig. 4a). These results suggest that ice plant may be more susceptible to infection with A. rhizogenes A8196. The percentage of plants with GUS activity in roots peaked at 2 weeks after infection and remained with no significant change since 4 weeks after infection, so the decrease in the transformation efficiency at 3 weeks after infection might be due to the lack of stable T-DNA integration or lack of T-DNA-encoded gene expression in the transformed plants. Representative mock control plants and plants infected with A. rhizogenes A8196 and NCPPB 1855 showing GUS activities in roots at 8 weeks are shown in Fig. 4b—4, 5, 6, respectively.
To examine the T-DNA integration in infected roots, Southern blotting was performed in roots infected with A. rhizogenes A8196 and NCPPB 1855 at 8 weeks after infection. There are two SphI sites in the pCAMBIA1303: one is around the multiple cloning sites, and another one is just outside of T-DNA right border (Fig. 4c). Genomic DNA was digested with SphI and detected by a 32P-labeled GUS probe. At least 3 and 5 hybridizing fragments were detected in roots infected with A8196 and NCPPB 1855, respectively. The sizes of all the SphI-digested fragments were larger than the GUS-containing fragment of SphI-digested pCAMBIA1303 plasmid, indicating multiple independent insertion events may have occurred in both infection treatments (Fig. 4d). In order to examine if bacteria DNA might exist in our genomic DNA isolation from ice plants, genomic DNA PCR with the Kan gene was also performed. Genomic DNA PCR results showed that no Kan gene fragment was amplified from genomic DNA isolated from the A. rhizogenes A8196 and NCPPB 1855-infected ice plants root tissues (Additional file 5: Figure S2A). GUS protein was detected in roots infected with the two A. rhizogenes strains but not mock control plants (Additional file 5: Figure S2B). In addition, no GUS protein was detected in leaf tissues of plants infected with the A. rhizogenes strains at 8 weeks after infection (Additional file 5: Figure S2C). These immunoblot results were consistent with observations of no GUS activity detected in leaf tissues of transformed plants infected with the two A. rhizogenes strains (Additional file 6: Figure S3).
The fresh weight and length of roots of plants infected with A. rhizogenes strains were examined to determine growth effects of transgenic roots on hydroponically grown plants. The root lengths of infected plants and mock control plants were measured every week from 7 days after infections (Fig. 5a). The root lengths of the ice plants infected with A. rhizogenes A8196 were the longest as compared with the other infected and mock control plants from 1 week after infection (Fig. 5a). The root lengths of A. rhizogenes NCPPB 1855-infected plants started to catch up at week 3 and became indistinguishable at week 7 from A8196-infected plants (Fig. 5a). The root lengths of A. rhizogenes A8196- and NCPPB 1855-infected plants were 20% longer than the mock control plants at 8 weeks after infection. The root fresh weights of plants infected with A8196 and NCPPB 1855 increased 2.3- to 2.6-fold compared to mock control plants at the end of 8-week period (Fig. 5b, c). Because of the improved root growth of A. rhizogenes-infected plants, the fresh weights of aerial parts of infected plants also increased. The fresh weights of aerial parts of plants infected with two A. rhizogenes strains increased 1.7-fold as compared with mock control plants (Fig. 5b, d). The results showed two strains of A. rhizogenes efficiently infect the roots of ice plant and promote growth of the whole plant.
In summary, we obtained the highest transient transformation efficiency with 5-day-old ice plant callus when co-incubated with an A. tumefaciens at 2.5 × 109 cfu mL−1 for 2 days. We also successfully used the A. tumefaciens and A. rhizogenes to transiently transform ice plant seedlings and obtained 66–85% and 33–100% transient transformation rates in 3-day-old seedlings, respectively. Finally, pot-grown juvenile plants were infected with A. rhizogenes, and then were grown hydroponically to obtain transformed roots expressing GUS reporter genes. More than 27% of plants which were infected with A. rhizogenes A8196 had transformed roots for 8 consecutive weeks.
Global climate change has caused rising temperatures and decreasing rainfall, which increases agricultural irrigation needs and vapor transpiration rates, and in turn accelerates the risk of soil salinity and jeopardizes plant growth and crop yields. The ice plant is a halophyte that can tolerate high levels of Na+ equivalent to that in seawater during plant growth. It is an important model species for researching plant salinity responses and the inducible CAM pathways (Bohnert and Cushman 2000; Cushman and Borland 2002). However, the lack of an easy and efficient transformation system has impeded functional studies of stress-related genes in ice plants. In this study, we used two types of Agrobacterium strains, A. tumefaciens and A. rhizogenes, to establish transient transformation methods with three kinds of ice plant materials, callus, seedlings and pot-grown plants. Among all the tested Agrobacterium strains, A. tumefaciens EHA105 and A. rhizogenes A4 strains yielded the best transient transformation rates with 3-day-old seedlings with root tip removed. The 5-day-old callus showed the highest transient transformation efficiency. Additionally, the A. rhizogenes A8196 strain produced the highest percentage of ice plants with transformed roots.
The plant materials frequently used to infect with Agrobacterium and establish transformation systems are mature embryos, immature embryos, or callus from explants of leaves, roots, cotyledons, hypocotyls, and other tissues. These plant cells tend to be vigorously dividing or about to divide and can regenerate easily (Mannan et al. 2009; Anami et al. 2013). The proteins involved in DNA replication and repair machinery are highly expressed in these actively dividing cells and play key roles in establishing successful transformation methods (Gelvin 2017). Therefore, we used ice plant callus to be infected with A. tumefaciens and establish transformation protocols. The younger plant callus, 5- and 7-day-old callus, yielded higher transient transformation rates than 14-day-old callus (Fig. 1b). Ishimaru (1999) reported that no transformed callus was obtained from explants of 2-week-old leaf, cotyledon, and callus tissues. In this study, we have successfully transiently transformed 5-day-old callus with 3% transformation rates. These data suggest that younger plant cells may be more susceptible to Agrobacterium infection than older cells and the ability to vigorously divide or regenerate in plant materials is important in successful transformation. Similar results were obtained with other plant species, including rice, maize, tomato, and loblolly pine (Pinus taeda L.), showing younger plant cells more susceptible to Agrobacterium infection than older cells (Hiei et al. 1997; Tang 2001; Cheng et al. 2004; Qiu et al. 2007). In this study, more than 92% of 3-day-old ice plant seedlings showed transgene expressions in root and cotyledon tissues after infected with A. rhizogenes. Compared to previous studies (Andolfatto et al. 1994; Konieczny et al. 2011), relatively higher transient transformation efficiencies were obtained in this study might be due to different age of ice plant seedlings were used. We have utilized much younger seedlings, 3-day-old seedlings, to establish transformation system instead of 14-day-old seedlings which were used in studies of Andolfatto et al. (1994) and Konieczny et al. (2011). These data also demonstrate that careful selection of the type and quality of the plant materials used for transformation is crucial for establishing effective transformation methods.
Another vital factor that may contribute to the success of transient and stable transformation assay is the concentration of bacteria culture. Konieczny et al. (2011) reported that optimal density of A. rhizogenes culture for ice plant seedlings transformation was OD600 = 2 (around 2 × 109 cfu mL−1) and higher bacteria concentration caused significant decreases in transformation efficiencies. In this study, we used the bacteria concentration 2.5 × 109 cfu mL−1 to infect ice plant callus for 48 h, and showed the highest transient transformation efficiency at 24 h after infection (Fig. 1a). Furthermore, the seedlings were infected with 2.5 × 109 cfu mL−1 A. tumefaciens or 2 × 109 cfu mL−1 A. rhizogenes to establish successful transient transformation systems. These data and previous studies both suggest that the best bacteria concentration used to infect plant cells ranges from 108 to 109 cfu mL−1 (Tepfer 1984; Andolfatto et al. 1994; Ishimaru 1999; Hiei et al. 1997; Tang 2001; Cheng et al. 2004; Konieczny et al. 2011). A too-high bacteria concentration may cause too much plant tissue damage and cell death from bacteria infection and a too-low concentration may not produce enough T-DNA and Vir proteins for effective transformation.
A previous study has used three A. rhizogenes strains A4, C58C1 (pRi8196), and ARqua1 to transform 2-week-old ice plant seedlings and produce transgenic roots with 20% transformation rates (Andolfatto et al. 1994). Similarly, Konieczny et al. (2011) utilized the A. rhizogenes strain ARqua1 to infect 7 and 14-day-old ice plant seedlings to obtain transgenic roots with 6% and 20% transformation efficiencies, respectively. The transformed roots showed the hairy root phenotype and were grown in liquid MS media without exogenous plant hormones for more than 2 years. In addition, the transformed callus was induced and obtained from these transgenic hairy roots which were cultured in the solidified MS media with cytokinin and auxin for at least 4–6 weeks (Konieczny et al. 2011). In our study, we have first initiated and maintained large amounts ice plant callus in CIM media. Next, we have effectively used the A. tumefaciens strain to infect ice plant callus; expressed transgene in these ice plant callus within 4 weeks using our established protocols. This experimental strategy has provided us with shorter time period to establish transgenic ice plant callus and more materials to study various gene functions in ice plant callus.
Another vital factor that may contribute high transient transformation efficiencies might be full induction of vir gene expressions in Agrobacterium. Transient transformation efficiencies of ice plant seedlings were 1.3- to 1.7-fold higher when root tips were removed in comparison to intact seedlings (Table 1). These data further support that the existence of wounded sites in plants may help with Agrobacterium infection by producing a phenolic compound to induce vir gene expression and making plant cells vigorously divide to be competent for transformation. In addition, we have added 200 μM acetosyringone (AS) in our bacteria culture to fully induce vir gene expressions in Agrobacterium. In previous studies (Andolfatto et al. 1994; Ishimaru 1999; Konieczny et al. 2011), Agrobacterium strains were only cultured in rich media without additions of AS. In this study, Agrobacterium was specifically cultured in acidic minimal medium (AB-MES media), which contained glucose and low phosphate, and 200 μM AS to maximize vir gene expression in bacteria and may therefore result in successful and more effective transformation in ice plant callus and seedlings.
Although efficient transient transformation system of aseptically grown ice plant seedlings was successfully established in this study, no stable transformed roots were acquired from these seedlings. Andolfatto et al. (1994) and Konieczny et al. (2011) both reported labor-intensive and time-consuming transformation and tissue culture protocols to establish ice plants containing transgenic roots with relatively low transformation rates, 6–20%. In order to circumvent the long and grueling tissue culture system of whole-plant regeneration from ice plant callus or seedlings, pot-grown ice plants were first syringe-injected with A. rhizogenes A8196 or NCPPB 1855 bacteria cultures and then grown hydroponically to induce transgenic root formations; more than 35% of plants contained transgenic roots at 1 week after infected with A. rhizogenes A8196. Two weeks after infections, more than 75% of plants had transgenic roots after infections. These infected plants were continuously grown hydroponically for transgene expressions in root tissues without generating whole new transgenic plants.
Among the two tested A. rhizogenes strains, A. rhizogenes A8196 had higher transformation efficiency than the A. rhizogenes NCPPB 1855 in hydroponically grown ice plants (Fig. 4a), so A. rhizogenes A8196 may be more suitable to establish composite plant systems in ice plants than the other strain. However, GUS activities remained higher than 97% in both A. rhizogenes A4- and A8196-infected seedlings at 2 days after infection (Table 2), indicating ice plant seedlings were both highly susceptible to agropine-type A4 and mannopine-type A8196 infection. These different results may be caused by different ages of plant materials and/or different infection methods used to examine transformation efficiency.
The A. rhizogenes causes hairy root productions due to the transfer, integration, and expression of the T-DNA from the Ri plasmid (Chilton et al. 1982; White et al. 1982). A. rhizogenes-mediated transformation has been used to study gene functions, produce transgenic roots and/or plants, produce secondary metabolite, and study plant–pathogen interactions (Christey 2001; Veena and Taylor 2007; Ono and Tian 2011). Genes located in the T-DNA regions of the Ri plasmid are involved in root induction and development (rol genes), opine biosynthesis, auxin biosynthesis and unknown functions (Veena and Taylor 2007; Georgiev et al. 2012). Previous studies have suggested that transformation by A. rhizogenes may cause changes in concentration and metabolism of different plant hormones in host tissues of several plant species, including ice plants (Nilsson et al. 1993; Lambert et al. 1998; Christey 2001; Konieczny et al. 2011). In our study, we have observed that these A. rhizogenes-infected ice plants showed better growth not only in roots but also in aerial parts of ice plants. The improved vegetative growth in A. rhizogenes-infected ice plants might be due to change of plant hormone amounts in host tissues. The effects of A. rhizogenes transformation on hormone amounts and metabolism in ice plant tissues await further investigations.
Efficient Agrobacterium-mediated transformation protocols were established in callus, seedlings, and roots of halophyte M. crystallinum. The successfully established transformation systems by A. tumefaciens and A. rhizogenes will provide the plant research community with more effective tools to study gene functions in ice plants.
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HHH and HEY conceived, contributed to experiment design and wrote the manuscript. CHW, HWH, HHC, JFH, SFC, and FCH conducted experiments and analyzed data. All authors read and approved the final manuscript.
The authors thank the Hwang and Yen laboratory members for discussion and technical assistance.
The authors declare that they have no competing interests. The founding sponsors had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, and in the decision to publish the results.
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Bacterial strains and plasmids used in this study.
List of oligonucleotide primers used in this study.
The establishment of transgenic ice plant callus expressing the yellow fluorescent protein (YFP). (A) Representative untransformed ice plant callus grown on CIM with (1) 0 mg L−1 and (2) 25 mg L−1 glufosinate ammonium. Bar = 1 cm. (A-3) Fresh weight of untransformed ice plant callus grown on CIM with 0, 25, 50, 75, and 100 mg L−1 glufosinate ammonium (GLA). ΔFW: increased fresh weight mass. Average values of the increased fresh weight from at least three independent experiments. *P < 0.05 comparing with and without GLA by pairwise Student t-test. (B) Fluorescent observation of YFP-transformed callus-derived cells. (B1-3) Untransformed callus-derived cells; (B4-6) YFP-transformed callus-derived cells; (B1, B4) Bright field images; (B2, B5) Confocal microscopy images with the YFP filter; (B3, B6) merged images. Bar = 20 μm. (C) Genomic DNA PCR results of YFP (upper panel) and phosphoenolpyruvate carboxylase (PPC1) (lower panel) in plant callus. 1, 2: independent transformed plant callus lines; NC: untransformed callus as a negative control; arrow: predicted length of PCR product.
Transient transformation rates of A. rhizogenes A4 or A8196 strain harboring the pCAMBIA1303 plasmid in 7-day-old ice plant seedlings and distributions (%) of GUS staining in different tissues of 7-day-old ice plant seedlings.
Genomic DNA PCR results and immunoblot results of hydroponically grown ice plants after infection with the A. rhizogenes A8196 or NCPPB 1855 strain harboring the pCAMBIA1303 binary vector. (A) Genomic DNA was isolated from roots of A. rhizogenes A8196- or NCPPB 1855-infected plants infected and uninfected (mock control) plants. Distilled water was a negative control (N) in genomic DNA PCR. The pCAMBIA1303 (1303) plasmid was used as a positive control for the PCR reactions with primers of the GUS gene or the kanamycin resistance gene (Kan). (B) Immunoblot analysis of GUS protein and Coomassie blue staining of proteins extracted from root tissues of mock control and A. rhizogenes A8196- or NCPPB 1855-infected plants shown in the upper and lower panels, respectively. The antibody against ß-glucuronidase (GUS protein) was used for immunoblot analysis. (C) Immunoblot analysis of GUS protein and Coomassie blue staining of proteins extracted from roots or leaves of mock control and infected plants. The position of GUS is indicated. NaCl solution used to wash and resuspend bacteria was the mock control.
Representative GUS staining results of leaves from hydroponically grown ice plants after infected with the A. rhizogenes A8196 or NCPPB 1855 strains. Leaves of ice plants after infiltration with mock control (Panel A, D), infection with A. rhizogenes A8196 (Panel B, E) or NCPPB 1855 (Panel C, F). Mock control or bacteria infected leaves from plants 8 weeks after treatments are shown in panel A to C. Leaves after GUS staining are shown in panel D to F. Bar = 1 cm.
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Hwang, HH., Wang, CH., Chen, HH. et al. Effective Agrobacterium-mediated transformation protocols for callus and roots of halophyte ice plant (Mesembryanthemum crystallinum). Bot Stud 60, 1 (2019). https://doi.org/10.1186/s40529-018-0249-3
- Transformation protocol
- Ice plant
- Mesembryanthemum crystallinum